Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18■□□□□ 0.47
HADHAP40939 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
HADHAP40939 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
HADHAP40939 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HADHAP40939 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HADHAP40939 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HADHAP40939 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HADHAP40939 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HADHAP40939 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.99■□□□□ 0.47
HADHAP40939 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.99■□□□□ 0.47
HADHAP40939 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.99■□□□□ 0.47
HADHAP40939 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.99■□□□□ 0.47
HADHAP40939 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HADHAP40939 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
HADHAP40939 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HADHAP40939 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HADHAP40939 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HADHAP40939 AL031133.1-201ENST00000406807 723 ntBASIC17.99■□□□□ 0.47
HADHAP40939 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.99■□□□□ 0.47
HADHAP40939 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HADHAP40939 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.99■□□□□ 0.47
HADHAP40939 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.99■□□□□ 0.47
HADHAP40939 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.99■□□□□ 0.47
HADHAP40939 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
HADHAP40939 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HADHAP40939 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HADHAP40939 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.99■□□□□ 0.47
HADHAP40939 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
HADHAP40939 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HADHAP40939 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HADHAP40939 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HADHAP40939 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HADHAP40939 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HADHAP40939 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HADHAP40939 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HADHAP40939 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HADHAP40939 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HADHAP40939 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HADHAP40939 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HADHAP40939 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HADHAP40939 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.98■□□□□ 0.47
HADHAP40939 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
HADHAP40939 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HADHAP40939 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
HADHAP40939 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HADHAP40939 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HADHAP40939 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HADHAP40939 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HADHAP40939 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HADHAP40939 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HADHAP40939 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HADHAP40939 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.98■□□□□ 0.47
HADHAP40939 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
HADHAP40939 AL390719.2-201ENST00000606993 987 ntBASIC17.98■□□□□ 0.47
HADHAP40939 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.98■□□□□ 0.47
HADHAP40939 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HADHAP40939 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HADHAP40939 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HADHAP40939 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HADHAP40939 PRORSD1P-202ENST00000563365 2154 ntBASIC17.98■□□□□ 0.47
HADHAP40939 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HADHAP40939 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HADHAP40939 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.98■□□□□ 0.47
HADHAP40939 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HADHAP40939 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HADHAP40939 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HADHAP40939 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.98■□□□□ 0.47
HADHAP40939 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HADHAP40939 Z83836.1-201ENST00000624605 1642 ntBASIC17.98■□□□□ 0.47
HADHAP40939 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HADHAP40939 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HADHAP40939 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HADHAP40939 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
HADHAP40939 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HADHAP40939 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.97■□□□□ 0.47
HADHAP40939 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HADHAP40939 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
HADHAP40939 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HADHAP40939 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HADHAP40939 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.97■□□□□ 0.47
HADHAP40939 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.97■□□□□ 0.47
HADHAP40939 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HADHAP40939 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HADHAP40939 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.97■□□□□ 0.47
HADHAP40939 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.97■□□□□ 0.47
HADHAP40939 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HADHAP40939 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HADHAP40939 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.97■□□□□ 0.47
HADHAP40939 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HADHAP40939 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HADHAP40939 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.97■□□□□ 0.47
HADHAP40939 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HADHAP40939 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.96■□□□□ 0.47
HADHAP40939 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HADHAP40939 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HADHAP40939 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HADHAP40939 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
HADHAP40939 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HADHAP40939 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HADHAP40939 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms