Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFC3P40938 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFC3P40938 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.25■□□□□ 0.19
RFC3P40938 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFC3P40938 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC3P40938 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.25■□□□□ 0.19
RFC3P40938 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.25■□□□□ 0.19
RFC3P40938 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.25■□□□□ 0.19
RFC3P40938 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.25■□□□□ 0.19
RFC3P40938 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.25■□□□□ 0.19
RFC3P40938 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.25■□□□□ 0.19
RFC3P40938 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.25■□□□□ 0.19
RFC3P40938 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RFC3P40938 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.25■□□□□ 0.19
RFC3P40938 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC3P40938 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFC3P40938 AL096828.2-201ENST00000567259 1965 ntBASIC16.25■□□□□ 0.19
RFC3P40938 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RFC3P40938 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC3P40938 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.25■□□□□ 0.19
RFC3P40938 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC3P40938 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC3P40938 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RFC3P40938 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.25■□□□□ 0.19
RFC3P40938 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC3P40938 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC3P40938 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.24■□□□□ 0.19
RFC3P40938 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFC3P40938 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFC3P40938 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.24■□□□□ 0.19
RFC3P40938 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC3P40938 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RFC3P40938 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.24■□□□□ 0.19
RFC3P40938 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
RFC3P40938 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC3P40938 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC3P40938 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC3P40938 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC3P40938 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC3P40938 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC3P40938 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC3P40938 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC3P40938 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFC3P40938 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.24■□□□□ 0.19
RFC3P40938 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RFC3P40938 AL773604.1-201ENST00000617417 272 ntBASIC16.24■□□□□ 0.19
RFC3P40938 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.24■□□□□ 0.19
RFC3P40938 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RFC3P40938 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RFC3P40938 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC3P40938 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.24■□□□□ 0.19
RFC3P40938 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.24■□□□□ 0.19
RFC3P40938 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC3P40938 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC3P40938 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RFC3P40938 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC3P40938 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RFC3P40938 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.24■□□□□ 0.19
RFC3P40938 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.24■□□□□ 0.19
RFC3P40938 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RFC3P40938 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
RFC3P40938 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC3P40938 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC3P40938 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC3P40938 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.23■□□□□ 0.19
RFC3P40938 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.23■□□□□ 0.19
RFC3P40938 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RFC3P40938 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RFC3P40938 AC093010.1-201ENST00000473625 1624 ntBASIC16.23■□□□□ 0.19
RFC3P40938 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC3P40938 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC3P40938 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.23■□□□□ 0.19
RFC3P40938 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.23■□□□□ 0.19
RFC3P40938 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFC3P40938 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC3P40938 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.23■□□□□ 0.19
RFC3P40938 AL590627.1-203ENST00000421194 1026 ntBASIC16.23■□□□□ 0.19
RFC3P40938 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RFC3P40938 FGFR3P6-201ENST00000457012 610 ntBASIC16.23■□□□□ 0.19
RFC3P40938 AF186996.4-201ENST00000467186 377 ntBASIC16.23■□□□□ 0.19
RFC3P40938 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.23■□□□□ 0.19
RFC3P40938 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RFC3P40938 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.23■□□□□ 0.19
RFC3P40938 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFC3P40938 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.23■□□□□ 0.19
RFC3P40938 AP001005.1-201ENST00000571755 1248 ntBASIC16.23■□□□□ 0.19
RFC3P40938 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC3P40938 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.23■□□□□ 0.19
RFC3P40938 AL355877.3-201ENST00000622820 899 ntBASIC16.23■□□□□ 0.19
RFC3P40938 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.23■□□□□ 0.19
RFC3P40938 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFC3P40938 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC3P40938 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RFC3P40938 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC3P40938 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFC3P40938 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFC3P40938 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RFC3P40938 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC3P40938 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RFC3P40938 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms