Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CIITAP33076 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CIITAP33076 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CIITAP33076 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CIITAP33076 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CIITAP33076 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CIITAP33076 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.97■□□□□ 0.79
CIITAP33076 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CIITAP33076 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.97■□□□□ 0.79
CIITAP33076 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CIITAP33076 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.97■□□□□ 0.79
CIITAP33076 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CIITAP33076 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.97■□□□□ 0.79
CIITAP33076 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CIITAP33076 MTDHP3-201ENST00000594186 672 ntBASIC19.97■□□□□ 0.79
CIITAP33076 AC073592.4-201ENST00000623827 446 ntBASIC19.97■□□□□ 0.79
CIITAP33076 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CIITAP33076 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CIITAP33076 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CIITAP33076 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.97■□□□□ 0.79
CIITAP33076 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CIITAP33076 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.97■□□□□ 0.79
CIITAP33076 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.96■□□□□ 0.79
CIITAP33076 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CIITAP33076 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CIITAP33076 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CIITAP33076 AC012317.2-201ENST00000623305 2251 ntBASIC19.96■□□□□ 0.79
CIITAP33076 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CIITAP33076 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CIITAP33076 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.96■□□□□ 0.79
CIITAP33076 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.96■□□□□ 0.79
CIITAP33076 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CIITAP33076 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
CIITAP33076 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.96■□□□□ 0.79
CIITAP33076 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.96■□□□□ 0.79
CIITAP33076 AL160237.2-201ENST00000556165 472 ntBASIC19.96■□□□□ 0.79
CIITAP33076 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.96■□□□□ 0.79
CIITAP33076 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CIITAP33076 AC109462.3-201ENST00000573934 613 ntBASIC19.96■□□□□ 0.79
CIITAP33076 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.96■□□□□ 0.79
CIITAP33076 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.96■□□□□ 0.79
CIITAP33076 LINC01451-201ENST00000623792 534 ntBASIC19.96■□□□□ 0.79
CIITAP33076 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.96■□□□□ 0.79
CIITAP33076 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.96■□□□□ 0.79
CIITAP33076 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.96■□□□□ 0.79
CIITAP33076 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CIITAP33076 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CIITAP33076 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
CIITAP33076 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.95■□□□□ 0.78
CIITAP33076 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CIITAP33076 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.95■□□□□ 0.78
CIITAP33076 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.95■□□□□ 0.78
CIITAP33076 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.95■□□□□ 0.78
CIITAP33076 AC132938.5-201ENST00000624980 1813 ntBASIC19.95■□□□□ 0.78
CIITAP33076 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CIITAP33076 LINC00304-203ENST00000565008 1864 ntBASIC19.95■□□□□ 0.78
CIITAP33076 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CIITAP33076 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CIITAP33076 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CIITAP33076 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CIITAP33076 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.95■□□□□ 0.78
CIITAP33076 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.95■□□□□ 0.78
CIITAP33076 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.95■□□□□ 0.78
CIITAP33076 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CIITAP33076 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
CIITAP33076 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CIITAP33076 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CIITAP33076 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CIITAP33076 NOC2LP2-201ENST00000407594 1944 ntBASIC19.95■□□□□ 0.78
CIITAP33076 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CIITAP33076 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.95■□□□□ 0.78
CIITAP33076 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CIITAP33076 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.95■□□□□ 0.78
CIITAP33076 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CIITAP33076 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CIITAP33076 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CIITAP33076 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CIITAP33076 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CIITAP33076 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CIITAP33076 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.94■□□□□ 0.78
CIITAP33076 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CIITAP33076 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.94■□□□□ 0.78
CIITAP33076 SIGLEC16-201ENST00000599858 1437 ntBASIC19.94■□□□□ 0.78
CIITAP33076 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CIITAP33076 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.94■□□□□ 0.78
CIITAP33076 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CIITAP33076 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CIITAP33076 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CIITAP33076 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CIITAP33076 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CIITAP33076 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
CIITAP33076 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CIITAP33076 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CIITAP33076 AP002469.2-201ENST00000531724 424 ntBASIC19.94■□□□□ 0.78
CIITAP33076 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CIITAP33076 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.94■□□□□ 0.78
CIITAP33076 STK25P1-201ENST00000585406 838 ntBASIC19.94■□□□□ 0.78
CIITAP33076 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.94■□□□□ 0.78
CIITAP33076 TP73-AS1-207ENST00000624167 988 ntBASIC19.94■□□□□ 0.78
CIITAP33076 AC073592.5-201ENST00000624854 528 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms