Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
UBL4AP11441 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL4AP11441 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
UBL4AP11441 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
UBL4AP11441 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.47■□□□□ 0.23
UBL4AP11441 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.47■□□□□ 0.23
UBL4AP11441 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 AL645929.1-201ENST00000420084 975 ntBASIC16.47■□□□□ 0.23
UBL4AP11441 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.47■□□□□ 0.23
UBL4AP11441 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.47■□□□□ 0.23
UBL4AP11441 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.47■□□□□ 0.23
UBL4AP11441 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.47■□□□□ 0.23
UBL4AP11441 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.47■□□□□ 0.23
UBL4AP11441 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.47■□□□□ 0.23
UBL4AP11441 AC009154.2-201ENST00000621177 724 ntBASIC16.47■□□□□ 0.23
UBL4AP11441 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.47■□□□□ 0.23
UBL4AP11441 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
UBL4AP11441 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
UBL4AP11441 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.47■□□□□ 0.23
UBL4AP11441 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 AL353692.3-201ENST00000407031 1396 ntBASIC16.47■□□□□ 0.23
UBL4AP11441 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 PKD1P1-201ENST00000458669 6805 ntBASIC16.47■□□□□ 0.23
UBL4AP11441 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBL4AP11441 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
UBL4AP11441 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBL4AP11441 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBL4AP11441 AC018695.7-201ENST00000624587 2492 ntBASIC16.46■□□□□ 0.23
UBL4AP11441 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.46■□□□□ 0.23
UBL4AP11441 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBL4AP11441 GNAS-203ENST00000306120 1878 ntBASIC16.46■□□□□ 0.23
UBL4AP11441 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.46■□□□□ 0.23
UBL4AP11441 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBL4AP11441 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBL4AP11441 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBL4AP11441 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBL4AP11441 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
UBL4AP11441 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBL4AP11441 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
UBL4AP11441 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBL4AP11441 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.46■□□□□ 0.23
UBL4AP11441 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.46■□□□□ 0.23
UBL4AP11441 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.46■□□□□ 0.23
UBL4AP11441 AC005332.3-201ENST00000589904 676 ntBASIC16.46■□□□□ 0.23
UBL4AP11441 AL390719.2-201ENST00000606993 987 ntBASIC16.46■□□□□ 0.23
UBL4AP11441 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
UBL4AP11441 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
UBL4AP11441 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBL4AP11441 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
UBL4AP11441 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBL4AP11441 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.46■□□□□ 0.23
UBL4AP11441 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
UBL4AP11441 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
UBL4AP11441 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
UBL4AP11441 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
UBL4AP11441 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.46■□□□□ 0.22
UBL4AP11441 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
UBL4AP11441 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
UBL4AP11441 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.45■□□□□ 0.22
UBL4AP11441 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.45■□□□□ 0.22
UBL4AP11441 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.45■□□□□ 0.22
UBL4AP11441 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 Z83836.1-201ENST00000624605 1642 ntBASIC16.45■□□□□ 0.22
UBL4AP11441 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
UBL4AP11441 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.45■□□□□ 0.22
UBL4AP11441 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.45■□□□□ 0.22
UBL4AP11441 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.45■□□□□ 0.22
UBL4AP11441 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.45■□□□□ 0.22
UBL4AP11441 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
UBL4AP11441 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.45■□□□□ 0.22
UBL4AP11441 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBL4AP11441 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.45■□□□□ 0.22
UBL4AP11441 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.45■□□□□ 0.22
UBL4AP11441 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.45■□□□□ 0.22
UBL4AP11441 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
UBL4AP11441 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms