Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
SFTPBP07988 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SFTPBP07988 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SFTPBP07988 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.47■□□□□ 0.07
SFTPBP07988 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.47■□□□□ 0.07
SFTPBP07988 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.47■□□□□ 0.07
SFTPBP07988 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.47■□□□□ 0.07
SFTPBP07988 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.47■□□□□ 0.07
SFTPBP07988 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.47■□□□□ 0.07
SFTPBP07988 AL023973.1-201ENST00000624619 620 ntBASIC15.47■□□□□ 0.07
SFTPBP07988 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.47■□□□□ 0.07
SFTPBP07988 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SFTPBP07988 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SFTPBP07988 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
SFTPBP07988 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SFTPBP07988 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.47■□□□□ 0.07
SFTPBP07988 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SFTPBP07988 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SFTPBP07988 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.47■□□□□ 0.07
SFTPBP07988 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SFTPBP07988 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SFTPBP07988 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SFTPBP07988 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SFTPBP07988 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
SFTPBP07988 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
SFTPBP07988 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SFTPBP07988 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.47■□□□□ 0.07
SFTPBP07988 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.46■□□□□ 0.07
SFTPBP07988 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
SFTPBP07988 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.46■□□□□ 0.07
SFTPBP07988 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
SFTPBP07988 PCDHA12-202ENST00000613593 2588 ntBASIC15.46■□□□□ 0.07
SFTPBP07988 AL024508.2-201ENST00000607749 1894 ntBASIC15.46■□□□□ 0.07
SFTPBP07988 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
SFTPBP07988 AC012317.2-201ENST00000623305 2251 ntBASIC15.46■□□□□ 0.07
SFTPBP07988 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.46■□□□□ 0.07
SFTPBP07988 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.46■□□□□ 0.07
SFTPBP07988 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.46■□□□□ 0.07
SFTPBP07988 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.46■□□□□ 0.07
SFTPBP07988 AC009947.2-201ENST00000444014 672 ntBASIC15.46■□□□□ 0.07
SFTPBP07988 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
SFTPBP07988 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.46■□□□□ 0.07
SFTPBP07988 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.46■□□□□ 0.07
SFTPBP07988 AC009065.1-201ENST00000564055 1225 ntBASIC15.46■□□□□ 0.07
SFTPBP07988 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.46■□□□□ 0.07
SFTPBP07988 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.46■□□□□ 0.07
SFTPBP07988 MIR3180-4-201ENST00000582223 153 ntBASIC15.46■□□□□ 0.07
SFTPBP07988 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.46■□□□□ 0.07
SFTPBP07988 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.46■□□□□ 0.07
SFTPBP07988 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.46■□□□□ 0.07
SFTPBP07988 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
SFTPBP07988 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.46■□□□□ 0.07
SFTPBP07988 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.46■□□□□ 0.07
SFTPBP07988 SIRPAP1-201ENST00000448467 1770 ntBASIC15.46■□□□□ 0.07
SFTPBP07988 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SFTPBP07988 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SFTPBP07988 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.46■□□□□ 0.06
SFTPBP07988 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
SFTPBP07988 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SFTPBP07988 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SFTPBP07988 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.46■□□□□ 0.06
SFTPBP07988 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SFTPBP07988 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SFTPBP07988 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SFTPBP07988 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SFTPBP07988 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SFTPBP07988 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.45■□□□□ 0.06
SFTPBP07988 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.45■□□□□ 0.06
SFTPBP07988 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SFTPBP07988 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SFTPBP07988 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SFTPBP07988 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms