Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPN1SWP03999 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPN1SWP03999 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPN1SWP03999 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPN1SWP03999 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
OPN1SWP03999 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
OPN1SWP03999 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPN1SWP03999 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
OPN1SWP03999 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
OPN1SWP03999 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
OPN1SWP03999 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.62■□□□□ 0.25
OPN1SWP03999 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
OPN1SWP03999 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
OPN1SWP03999 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
OPN1SWP03999 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
OPN1SWP03999 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
OPN1SWP03999 MMP23A-201ENST00000234610 1017 ntBASIC16.62■□□□□ 0.25
OPN1SWP03999 HMGA1P5-201ENST00000412453 271 ntBASIC16.62■□□□□ 0.25
OPN1SWP03999 PVRIG2P-201ENST00000435460 978 ntBASIC16.62■□□□□ 0.25
OPN1SWP03999 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.62■□□□□ 0.25
OPN1SWP03999 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
OPN1SWP03999 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.62■□□□□ 0.25
OPN1SWP03999 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.62■□□□□ 0.25
OPN1SWP03999 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.62■□□□□ 0.25
OPN1SWP03999 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.62■□□□□ 0.25
OPN1SWP03999 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.62■□□□□ 0.25
OPN1SWP03999 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
OPN1SWP03999 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.62■□□□□ 0.25
OPN1SWP03999 NEK4P2-201ENST00000580004 1012 ntBASIC16.62■□□□□ 0.25
OPN1SWP03999 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
OPN1SWP03999 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
OPN1SWP03999 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
OPN1SWP03999 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
OPN1SWP03999 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
OPN1SWP03999 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
OPN1SWP03999 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
OPN1SWP03999 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
OPN1SWP03999 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
OPN1SWP03999 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
OPN1SWP03999 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.62■□□□□ 0.25
OPN1SWP03999 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.62■□□□□ 0.25
OPN1SWP03999 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
OPN1SWP03999 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
OPN1SWP03999 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
OPN1SWP03999 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
OPN1SWP03999 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.61■□□□□ 0.25
OPN1SWP03999 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
OPN1SWP03999 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
OPN1SWP03999 REXO1L11P-201ENST00000620964 1927 ntBASIC16.61■□□□□ 0.25
OPN1SWP03999 HLA-J-201ENST00000462773 1622 ntBASIC16.61■□□□□ 0.25
OPN1SWP03999 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
OPN1SWP03999 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
OPN1SWP03999 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.61■□□□□ 0.25
OPN1SWP03999 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
OPN1SWP03999 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
OPN1SWP03999 AC008687.5-201ENST00000593746 558 ntBASIC16.61■□□□□ 0.25
OPN1SWP03999 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
OPN1SWP03999 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.61■□□□□ 0.25
OPN1SWP03999 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
OPN1SWP03999 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
OPN1SWP03999 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.61■□□□□ 0.25
OPN1SWP03999 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
OPN1SWP03999 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
OPN1SWP03999 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.61■□□□□ 0.25
OPN1SWP03999 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.61■□□□□ 0.25
OPN1SWP03999 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.61■□□□□ 0.25
OPN1SWP03999 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
OPN1SWP03999 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
OPN1SWP03999 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
OPN1SWP03999 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
OPN1SWP03999 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
OPN1SWP03999 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
OPN1SWP03999 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
OPN1SWP03999 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
OPN1SWP03999 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
OPN1SWP03999 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
OPN1SWP03999 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
OPN1SWP03999 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
OPN1SWP03999 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
OPN1SWP03999 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.6■□□□□ 0.25
OPN1SWP03999 AC011676.5-201ENST00000624864 2660 ntBASIC16.6■□□□□ 0.25
OPN1SWP03999 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
OPN1SWP03999 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
OPN1SWP03999 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.6■□□□□ 0.25
OPN1SWP03999 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
OPN1SWP03999 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.6■□□□□ 0.25
OPN1SWP03999 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.6■□□□□ 0.25
OPN1SWP03999 AL512604.3-201ENST00000569583 964 ntBASIC16.6■□□□□ 0.25
OPN1SWP03999 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
OPN1SWP03999 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
OPN1SWP03999 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.6■□□□□ 0.25
OPN1SWP03999 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
OPN1SWP03999 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
OPN1SWP03999 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
OPN1SWP03999 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.6■□□□□ 0.25
OPN1SWP03999 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.6■□□□□ 0.25
OPN1SWP03999 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.6■□□□□ 0.25
OPN1SWP03999 NKILA-202ENST00000614771 2598 ntBASIC16.6■□□□□ 0.25
OPN1SWP03999 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
OPN1SWP03999 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms