Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MSI1O43347 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.45■□□□□ 0.54
MSI1O43347 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.44■□□□□ 0.54
MSI1O43347 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
MSI1O43347 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MSI1O43347 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MSI1O43347 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MSI1O43347 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
MSI1O43347 AC004870.1-201ENST00000315132 882 ntBASIC18.44■□□□□ 0.54
MSI1O43347 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MSI1O43347 AC079781.3-201ENST00000449110 356 ntBASIC18.44■□□□□ 0.54
MSI1O43347 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.44■□□□□ 0.54
MSI1O43347 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.44■□□□□ 0.54
MSI1O43347 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
MSI1O43347 AP001269.4-201ENST00000609611 512 ntBASIC18.44■□□□□ 0.54
MSI1O43347 AC116407.2-201ENST00000613639 860 ntBASIC18.44■□□□□ 0.54
MSI1O43347 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.44■□□□□ 0.54
MSI1O43347 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.44■□□□□ 0.54
MSI1O43347 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MSI1O43347 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MSI1O43347 SIRPAP1-201ENST00000448467 1770 ntBASIC18.44■□□□□ 0.54
MSI1O43347 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.44■□□□□ 0.54
MSI1O43347 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
MSI1O43347 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MSI1O43347 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MSI1O43347 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MSI1O43347 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSI1O43347 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
MSI1O43347 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSI1O43347 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
MSI1O43347 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
MSI1O43347 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
MSI1O43347 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.43■□□□□ 0.54
MSI1O43347 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.43■□□□□ 0.54
MSI1O43347 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.43■□□□□ 0.54
MSI1O43347 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.43■□□□□ 0.54
MSI1O43347 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
MSI1O43347 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSI1O43347 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSI1O43347 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MSI1O43347 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MSI1O43347 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSI1O43347 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSI1O43347 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MSI1O43347 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.43■□□□□ 0.54
MSI1O43347 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSI1O43347 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.43■□□□□ 0.54
MSI1O43347 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
MSI1O43347 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.43■□□□□ 0.54
MSI1O43347 TPM4P1-201ENST00000436100 807 ntBASIC18.43■□□□□ 0.54
MSI1O43347 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.43■□□□□ 0.54
MSI1O43347 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.43■□□□□ 0.54
MSI1O43347 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.43■□□□□ 0.54
MSI1O43347 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.43■□□□□ 0.54
MSI1O43347 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
MSI1O43347 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.43■□□□□ 0.54
MSI1O43347 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MSI1O43347 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MSI1O43347 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
MSI1O43347 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.43■□□□□ 0.54
MSI1O43347 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.43■□□□□ 0.54
MSI1O43347 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.43■□□□□ 0.54
MSI1O43347 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSI1O43347 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MSI1O43347 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSI1O43347 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
MSI1O43347 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
MSI1O43347 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSI1O43347 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
MSI1O43347 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSI1O43347 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.42■□□□□ 0.54
MSI1O43347 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.42■□□□□ 0.54
MSI1O43347 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
MSI1O43347 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.42■□□□□ 0.54
MSI1O43347 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSI1O43347 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
MSI1O43347 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSI1O43347 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSI1O43347 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSI1O43347 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSI1O43347 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.42■□□□□ 0.54
MSI1O43347 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSI1O43347 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSI1O43347 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSI1O43347 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.42■□□□□ 0.54
MSI1O43347 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MSI1O43347 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.42■□□□□ 0.54
MSI1O43347 SAPCD2P3-201ENST00000455031 850 ntBASIC18.42■□□□□ 0.54
MSI1O43347 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
MSI1O43347 AF238378.1-201ENST00000526806 358 ntBASIC18.42■□□□□ 0.54
MSI1O43347 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.42■□□□□ 0.54
MSI1O43347 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.42■□□□□ 0.54
MSI1O43347 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MSI1O43347 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MSI1O43347 AL031008.1-201ENST00000619963 541 ntBASIC18.42■□□□□ 0.54
MSI1O43347 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
MSI1O43347 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MSI1O43347 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
MSI1O43347 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MSI1O43347 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms