Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLDN4O14493 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CLDN4O14493 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLDN4O14493 AC100803.2-201ENST00000562459 1963 ntBASIC16.75■□□□□ 0.27
CLDN4O14493 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN4O14493 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLDN4O14493 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CLDN4O14493 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLDN4O14493 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CLDN4O14493 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN4O14493 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CLDN4O14493 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN4O14493 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 DDX43P3-201ENST00000441064 443 ntBASIC16.75■□□□□ 0.27
CLDN4O14493 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLDN4O14493 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.75■□□□□ 0.27
CLDN4O14493 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.75■□□□□ 0.27
CLDN4O14493 PRELID1P1-202ENST00000567272 903 ntBASIC16.75■□□□□ 0.27
CLDN4O14493 AC099336.1-202ENST00000602961 463 ntBASIC16.75■□□□□ 0.27
CLDN4O14493 AL138831.2-201ENST00000606564 490 ntBASIC16.75■□□□□ 0.27
CLDN4O14493 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN4O14493 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN4O14493 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CLDN4O14493 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CLDN4O14493 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN4O14493 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN4O14493 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN4O14493 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN4O14493 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN4O14493 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN4O14493 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN4O14493 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN4O14493 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN4O14493 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN4O14493 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN4O14493 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CLDN4O14493 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN4O14493 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN4O14493 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN4O14493 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN4O14493 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN4O14493 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN4O14493 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN4O14493 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN4O14493 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN4O14493 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.74■□□□□ 0.27
CLDN4O14493 AC091607.1-201ENST00000490318 1060 ntBASIC16.74■□□□□ 0.27
CLDN4O14493 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN4O14493 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN4O14493 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN4O14493 AP005901.3-202ENST00000581653 237 ntBASIC16.74■□□□□ 0.27
CLDN4O14493 AC005336.2-201ENST00000593183 939 ntBASIC16.74■□□□□ 0.27
CLDN4O14493 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN4O14493 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN4O14493 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.74■□□□□ 0.27
CLDN4O14493 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN4O14493 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN4O14493 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN4O14493 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CLDN4O14493 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN4O14493 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN4O14493 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN4O14493 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN4O14493 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLDN4O14493 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN4O14493 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN4O14493 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN4O14493 NOC2LP1-202ENST00000452600 2235 ntBASIC16.73■□□□□ 0.27
CLDN4O14493 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN4O14493 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN4O14493 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN4O14493 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CLDN4O14493 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN4O14493 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN4O14493 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CLDN4O14493 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN4O14493 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN4O14493 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms