Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.59■□□□□ 0.41
TLR4O00206 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
TLR4O00206 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.59■□□□□ 0.41
TLR4O00206 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TLR4O00206 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.58■□□□□ 0.41
TLR4O00206 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TLR4O00206 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
TLR4O00206 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.58■□□□□ 0.41
TLR4O00206 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.58■□□□□ 0.41
TLR4O00206 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TLR4O00206 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TLR4O00206 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TLR4O00206 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TLR4O00206 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TLR4O00206 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TLR4O00206 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.58■□□□□ 0.4
TLR4O00206 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.58■□□□□ 0.4
TLR4O00206 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.58■□□□□ 0.4
TLR4O00206 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.58■□□□□ 0.4
TLR4O00206 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.58■□□□□ 0.4
TLR4O00206 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TLR4O00206 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
TLR4O00206 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.58■□□□□ 0.4
TLR4O00206 AC008735.5-201ENST00000623544 497 ntBASIC17.58■□□□□ 0.4
TLR4O00206 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TLR4O00206 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TLR4O00206 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.58■□□□□ 0.4
TLR4O00206 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TLR4O00206 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TLR4O00206 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TLR4O00206 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TLR4O00206 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TLR4O00206 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TLR4O00206 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TLR4O00206 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TLR4O00206 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.57■□□□□ 0.4
TLR4O00206 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TLR4O00206 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TLR4O00206 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.57■□□□□ 0.4
TLR4O00206 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TLR4O00206 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TLR4O00206 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.57■□□□□ 0.4
TLR4O00206 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.57■□□□□ 0.4
TLR4O00206 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TLR4O00206 AC098831.1-202ENST00000438821 336 ntBASIC17.57■□□□□ 0.4
TLR4O00206 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.57■□□□□ 0.4
TLR4O00206 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TLR4O00206 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.57■□□□□ 0.4
TLR4O00206 AC027601.4-201ENST00000611259 610 ntBASIC17.57■□□□□ 0.4
TLR4O00206 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TLR4O00206 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.57■□□□□ 0.4
TLR4O00206 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 AC126763.1-201ENST00000552015 2118 ntBASIC17.57■□□□□ 0.4
TLR4O00206 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.57■□□□□ 0.4
TLR4O00206 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TLR4O00206 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.57■□□□□ 0.4
TLR4O00206 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.57■□□□□ 0.4
TLR4O00206 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TLR4O00206 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
TLR4O00206 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TLR4O00206 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TLR4O00206 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TLR4O00206 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.56■□□□□ 0.4
TLR4O00206 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TLR4O00206 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TLR4O00206 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TLR4O00206 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TLR4O00206 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.56■□□□□ 0.4
TLR4O00206 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TLR4O00206 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TLR4O00206 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TLR4O00206 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TLR4O00206 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TLR4O00206 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TLR4O00206 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.56■□□□□ 0.4
TLR4O00206 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TLR4O00206 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms