Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRGV4A0A0C4DH28 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV4A0A0C4DH28 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TRGV4A0A0C4DH28 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV4A0A0C4DH28 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV4A0A0C4DH28 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.8□□□□□ -0.36
TRGV4A0A0C4DH28 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.8□□□□□ -0.36
TRGV4A0A0C4DH28 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV4A0A0C4DH28 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.8□□□□□ -0.36
TRGV4A0A0C4DH28 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV4A0A0C4DH28 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV4A0A0C4DH28 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TRGV4A0A0C4DH28 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRGV4A0A0C4DH28 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
TRGV4A0A0C4DH28 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 AC073508.3-201ENST00000619697 1419 ntBASIC12.79□□□□□ -0.36
TRGV4A0A0C4DH28 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 SPDYE15P-201ENST00000424157 909 ntBASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 AC113404.2-201ENST00000507884 177 ntBASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 AC116407.2-201ENST00000613639 860 ntBASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 AC134043.2-201ENST00000624206 2238 ntBASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 AC005332.8-201ENST00000622750 2735 ntBASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 AC063926.3-201ENST00000624734 5658 ntBASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 KRT89P-201ENST00000620027 1478 ntBASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRGV4A0A0C4DH28 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV4A0A0C4DH28 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
TRGV4A0A0C4DH28 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRGV4A0A0C4DH28 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms