Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRBV5-3A0A0A0MS03 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 AC046185.3-201ENST00000623228 1824 ntBASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 AC096633.1-201ENST00000422446 749 ntBASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 TMEM191A-211ENST00000637163 1067 ntBASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRBV5-3A0A0A0MS03 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 SPDYE15P-201ENST00000424157 909 ntBASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 KRT18P48-201ENST00000434763 852 ntBASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 KRT18P22-201ENST00000402024 1347 ntBASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV5-3A0A0A0MS03 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV5-3A0A0A0MS03 IGHGP-201ENST00000390555 1178 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms