Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 AC053503.5-201ENST00000601508 636 ntBASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 AC060834.1-201ENST00000443027 2032 ntBASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SPCS1Q9Y6A9 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SPCS1Q9Y6A9 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SPCS1Q9Y6A9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SPCS1Q9Y6A9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SPCS1Q9Y6A9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC12.15□□□□□ -0.47
SPCS1Q9Y6A9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.47
SPCS1Q9Y6A9 AL137784.3-201ENST00000623858 2288 ntBASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 AL122018.1-201ENST00000446607 2310 ntBASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 SMUG1P1-201ENST00000590640 811 ntBASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 AC008175.2-201ENST00000612840 297 ntBASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 AC104417.2-201ENST00000562989 1793 ntBASIC12.14□□□□□ -0.47
SPCS1Q9Y6A9 AC005915.1-201ENST00000624912 2018 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms