Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 AC067852.2-201ENST00000590513 2313 ntBASIC21.18■□□□□ 0.98
HPS5Q9UPZ3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HPS5Q9UPZ3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HPS5Q9UPZ3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HPS5Q9UPZ3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
HPS5Q9UPZ3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.18■□□□□ 0.98
HPS5Q9UPZ3 LINC00602-201ENST00000629776 2065 ntBASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 IGHGP-201ENST00000390555 1178 ntBASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.17■□□□□ 0.98
HPS5Q9UPZ3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 FGFR3P6-201ENST00000457012 610 ntBASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPS5Q9UPZ3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 DUTP2-201ENST00000519164 463 ntBASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 AC011840.4-201ENST00000578471 627 ntBASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS5Q9UPZ3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.14■□□□□ 0.98
HPS5Q9UPZ3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HPS5Q9UPZ3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HPS5Q9UPZ3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
HPS5Q9UPZ3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HPS5Q9UPZ3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HPS5Q9UPZ3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.14■□□□□ 0.98
HPS5Q9UPZ3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HPS5Q9UPZ3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.14■□□□□ 0.97
HPS5Q9UPZ3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
HPS5Q9UPZ3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HPS5Q9UPZ3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
HPS5Q9UPZ3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.14■□□□□ 0.97
HPS5Q9UPZ3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.14■□□□□ 0.97
HPS5Q9UPZ3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
HPS5Q9UPZ3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.14■□□□□ 0.97
HPS5Q9UPZ3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HPS5Q9UPZ3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HPS5Q9UPZ3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HPS5Q9UPZ3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
HPS5Q9UPZ3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.14■□□□□ 0.97
HPS5Q9UPZ3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms