Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 AL121832.2-201ENST00000610979 668 ntBASIC21.03■□□□□ 0.96
RTN4Q9NQC3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 GUSBP6-202ENST00000438529 1198 ntBASIC21.02■□□□□ 0.96
RTN4Q9NQC3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.02■□□□□ 0.96
RTN4Q9NQC3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTN4Q9NQC3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RTN4Q9NQC3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.02■□□□□ 0.95
RTN4Q9NQC3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RTN4Q9NQC3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC21.02■□□□□ 0.95
RTN4Q9NQC3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
RTN4Q9NQC3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RTN4Q9NQC3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.02■□□□□ 0.95
RTN4Q9NQC3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 HLA-B-256ENST00000639848 1089 ntBASIC21.01■□□□□ 0.95
RTN4Q9NQC3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 AC092368.3-202ENST00000574180 1591 ntBASIC21.01■□□□□ 0.95
RTN4Q9NQC3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 AC105917.1-201ENST00000506637 2539 ntBASIC21.01■□□□□ 0.95
RTN4Q9NQC3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.01■□□□□ 0.95
RTN4Q9NQC3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTN4Q9NQC3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
RTN4Q9NQC3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21■□□□□ 0.95
RTN4Q9NQC3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC21■□□□□ 0.95
RTN4Q9NQC3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RTN4Q9NQC3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21■□□□□ 0.95
RTN4Q9NQC3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms