Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.22■□□□□ 0.19
HMG20AQ9NP66 AC092850.2-201ENST00000623821 2697 ntBASIC16.22■□□□□ 0.19
HMG20AQ9NP66 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 TSPY21P-201ENST00000433481 731 ntBASIC16.21■□□□□ 0.19
HMG20AQ9NP66 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HMG20AQ9NP66 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HMG20AQ9NP66 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HMG20AQ9NP66 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
HMG20AQ9NP66 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HMG20AQ9NP66 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 AL603756.1-201ENST00000606511 2163 ntBASIC16.2■□□□□ 0.18
HMG20AQ9NP66 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 ESRRAP1-201ENST00000400596 1257 ntBASIC16.2■□□□□ 0.18
HMG20AQ9NP66 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 HLA-A-209ENST00000638375 975 ntBASIC16.2■□□□□ 0.18
HMG20AQ9NP66 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
HMG20AQ9NP66 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 AC026691.1-201ENST00000602502 2017 ntBASIC16.19■□□□□ 0.18
HMG20AQ9NP66 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 AC239809.2-201ENST00000415381 517 ntBASIC16.19■□□□□ 0.18
HMG20AQ9NP66 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 AL160286.2-201ENST00000567150 934 ntBASIC16.19■□□□□ 0.18
HMG20AQ9NP66 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 AL023875.1-201ENST00000640777 796 ntBASIC16.19■□□□□ 0.18
HMG20AQ9NP66 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.19■□□□□ 0.18
HMG20AQ9NP66 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMG20AQ9NP66 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms