Protein–RNA interactions for Protein: Q9H7V2

SYNDIG1, Synapse differentiation-inducing gene protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1Q9H7V2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 AL671883.3-201ENST00000603274 991 ntBASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 MIR7706-201ENST00000613747 67 ntBASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYNDIG1Q9H7V2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 FGFR3P6-201ENST00000457012 610 ntBASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 RNA5SP419-201ENST00000515908 135 ntBASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 LINC01126-201ENST00000623515 1646 ntBASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYNDIG1Q9H7V2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 MIR574-201ENST00000385209 96 ntBASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 RBM17P3-201ENST00000417687 1192 ntBASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 KRT18P58-201ENST00000527480 1120 ntBASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 TERC-201ENST00000602385 541 ntBASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.37■□□□□ 0.37
SYNDIG1Q9H7V2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms