Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC11.84□□□□□ -0.51
LITAFQ99732 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
LITAFQ99732 AC023824.1-201ENST00000562945 2975 ntBASIC11.84□□□□□ -0.51
LITAFQ99732 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC11.84□□□□□ -0.51
LITAFQ99732 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC11.84□□□□□ -0.51
LITAFQ99732 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
LITAFQ99732 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
LITAFQ99732 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 MIPEPP3-201ENST00000412105 444 ntBASIC11.84□□□□□ -0.51
LITAFQ99732 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC11.84□□□□□ -0.51
LITAFQ99732 AC004980.1-204ENST00000429707 299 ntBASIC11.84□□□□□ -0.51
LITAFQ99732 GXYLT1P2-201ENST00000433312 1230 ntBASIC11.84□□□□□ -0.51
LITAFQ99732 PRKY-204ENST00000533551 1019 ntBASIC11.84□□□□□ -0.51
LITAFQ99732 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC11.84□□□□□ -0.51
LITAFQ99732 NAT14-202ENST00000587400 416 ntTSL 5 BASIC11.84□□□□□ -0.51
LITAFQ99732 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC11.84□□□□□ -0.51
LITAFQ99732 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
LITAFQ99732 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
LITAFQ99732 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
LITAFQ99732 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC11.84□□□□□ -0.51
LITAFQ99732 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC11.84□□□□□ -0.51
LITAFQ99732 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC11.84□□□□□ -0.51
LITAFQ99732 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
LITAFQ99732 AC009949.1-201ENST00000623048 1830 ntBASIC11.83□□□□□ -0.51
LITAFQ99732 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
LITAFQ99732 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
LITAFQ99732 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC11.83□□□□□ -0.51
LITAFQ99732 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.83□□□□□ -0.51
LITAFQ99732 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
LITAFQ99732 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
LITAFQ99732 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC11.83□□□□□ -0.52
LITAFQ99732 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC11.83□□□□□ -0.52
LITAFQ99732 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC11.83□□□□□ -0.52
LITAFQ99732 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC11.83□□□□□ -0.52
LITAFQ99732 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC11.83□□□□□ -0.52
LITAFQ99732 ASL-204ENST00000395331 1538 ntTSL 5 BASIC11.83□□□□□ -0.52
LITAFQ99732 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC11.83□□□□□ -0.52
LITAFQ99732 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
LITAFQ99732 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC11.83□□□□□ -0.52
LITAFQ99732 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 AC131212.4-201ENST00000623606 975 ntBASIC11.83□□□□□ -0.52
LITAFQ99732 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC11.83□□□□□ -0.52
LITAFQ99732 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 PAUPAR-201ENST00000630360 2965 ntBASIC11.83□□□□□ -0.52
LITAFQ99732 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC11.83□□□□□ -0.52
LITAFQ99732 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC11.83□□□□□ -0.52
LITAFQ99732 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC11.83□□□□□ -0.52
LITAFQ99732 AC022898.2-201ENST00000616822 1312 ntBASIC11.83□□□□□ -0.52
LITAFQ99732 LINC02012-201ENST00000608206 1725 ntBASIC11.83□□□□□ -0.52
LITAFQ99732 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC11.83□□□□□ -0.52
LITAFQ99732 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LITAFQ99732 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC11.83□□□□□ -0.52
LITAFQ99732 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LITAFQ99732 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms