Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOTCH4Q99466 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.19■□□□□ 0.5
NOTCH4Q99466 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.19■□□□□ 0.5
NOTCH4Q99466 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NOTCH4Q99466 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.19■□□□□ 0.5
NOTCH4Q99466 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NOTCH4Q99466 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.19■□□□□ 0.5
NOTCH4Q99466 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.19■□□□□ 0.5
NOTCH4Q99466 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.19■□□□□ 0.5
NOTCH4Q99466 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.19■□□□□ 0.5
NOTCH4Q99466 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.19■□□□□ 0.5
NOTCH4Q99466 AC097637.2-201ENST00000624096 1997 ntBASIC18.19■□□□□ 0.5
NOTCH4Q99466 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NOTCH4Q99466 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.19■□□□□ 0.5
NOTCH4Q99466 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.19■□□□□ 0.5
NOTCH4Q99466 AP000997.3-201ENST00000623333 2250 ntBASIC18.19■□□□□ 0.5
NOTCH4Q99466 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NOTCH4Q99466 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NOTCH4Q99466 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.19■□□□□ 0.5
NOTCH4Q99466 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
NOTCH4Q99466 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NOTCH4Q99466 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.18■□□□□ 0.5
NOTCH4Q99466 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.18■□□□□ 0.5
NOTCH4Q99466 AL031432.2-201ENST00000566714 459 ntBASIC18.18■□□□□ 0.5
NOTCH4Q99466 AL928711.1-201ENST00000570165 459 ntBASIC18.18■□□□□ 0.5
NOTCH4Q99466 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.18■□□□□ 0.5
NOTCH4Q99466 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NOTCH4Q99466 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.18■□□□□ 0.5
NOTCH4Q99466 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NOTCH4Q99466 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.18■□□□□ 0.5
NOTCH4Q99466 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.18■□□□□ 0.5
NOTCH4Q99466 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.18■□□□□ 0.5
NOTCH4Q99466 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.18■□□□□ 0.5
NOTCH4Q99466 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.18■□□□□ 0.5
NOTCH4Q99466 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.18■□□□□ 0.5
NOTCH4Q99466 AL353135.1-201ENST00000606729 504 ntBASIC18.18■□□□□ 0.5
NOTCH4Q99466 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.18■□□□□ 0.5
NOTCH4Q99466 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NOTCH4Q99466 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH4Q99466 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
NOTCH4Q99466 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NOTCH4Q99466 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
NOTCH4Q99466 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.17■□□□□ 0.5
NOTCH4Q99466 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
NOTCH4Q99466 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.17■□□□□ 0.5
NOTCH4Q99466 MIR4469-201ENST00000583919 79 ntBASIC18.17■□□□□ 0.5
NOTCH4Q99466 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.17■□□□□ 0.5
NOTCH4Q99466 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NOTCH4Q99466 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NOTCH4Q99466 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NOTCH4Q99466 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NOTCH4Q99466 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NOTCH4Q99466 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NOTCH4Q99466 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NOTCH4Q99466 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.17■□□□□ 0.5
NOTCH4Q99466 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NOTCH4Q99466 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NOTCH4Q99466 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NOTCH4Q99466 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NOTCH4Q99466 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.16■□□□□ 0.5
NOTCH4Q99466 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.16■□□□□ 0.5
NOTCH4Q99466 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.16■□□□□ 0.5
NOTCH4Q99466 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.16■□□□□ 0.5
NOTCH4Q99466 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NOTCH4Q99466 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.16■□□□□ 0.5
NOTCH4Q99466 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.16■□□□□ 0.5
NOTCH4Q99466 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NOTCH4Q99466 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NOTCH4Q99466 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.16■□□□□ 0.5
NOTCH4Q99466 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NOTCH4Q99466 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NOTCH4Q99466 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NOTCH4Q99466 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.16■□□□□ 0.5
NOTCH4Q99466 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NOTCH4Q99466 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NOTCH4Q99466 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
NOTCH4Q99466 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NOTCH4Q99466 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NOTCH4Q99466 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
NOTCH4Q99466 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NOTCH4Q99466 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NOTCH4Q99466 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms