Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CALR3Q96L12 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CALR3Q96L12 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 NKILA-202ENST00000614771 2598 ntBASIC18.84■□□□□ 0.61
CALR3Q96L12 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CALR3Q96L12 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CALR3Q96L12 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CALR3Q96L12 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CALR3Q96L12 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CALR3Q96L12 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CALR3Q96L12 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CALR3Q96L12 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.83■□□□□ 0.61
CALR3Q96L12 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CALR3Q96L12 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.83■□□□□ 0.61
CALR3Q96L12 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CALR3Q96L12 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CALR3Q96L12 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CALR3Q96L12 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.83■□□□□ 0.61
CALR3Q96L12 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CALR3Q96L12 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.83■□□□□ 0.6
CALR3Q96L12 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CALR3Q96L12 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CALR3Q96L12 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.83■□□□□ 0.6
CALR3Q96L12 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CALR3Q96L12 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.83■□□□□ 0.6
CALR3Q96L12 AC009154.2-201ENST00000621177 724 ntBASIC18.83■□□□□ 0.6
CALR3Q96L12 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.83■□□□□ 0.6
CALR3Q96L12 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CALR3Q96L12 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CALR3Q96L12 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CALR3Q96L12 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CALR3Q96L12 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.83■□□□□ 0.6
CALR3Q96L12 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.83■□□□□ 0.6
CALR3Q96L12 AC009949.1-201ENST00000623048 1830 ntBASIC18.83■□□□□ 0.6
CALR3Q96L12 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CALR3Q96L12 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.83■□□□□ 0.6
CALR3Q96L12 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CALR3Q96L12 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.83■□□□□ 0.6
CALR3Q96L12 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CALR3Q96L12 AC046158.3-201ENST00000624947 2558 ntBASIC18.83■□□□□ 0.6
CALR3Q96L12 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.82■□□□□ 0.6
CALR3Q96L12 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CALR3Q96L12 CROCCP2-202ENST00000412962 2773 ntBASIC18.82■□□□□ 0.6
CALR3Q96L12 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CALR3Q96L12 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CALR3Q96L12 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CALR3Q96L12 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CALR3Q96L12 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CALR3Q96L12 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CALR3Q96L12 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CALR3Q96L12 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CALR3Q96L12 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CALR3Q96L12 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CALR3Q96L12 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CALR3Q96L12 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.82■□□□□ 0.6
CALR3Q96L12 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.82■□□□□ 0.6
CALR3Q96L12 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.82■□□□□ 0.6
CALR3Q96L12 AC005104.2-201ENST00000427818 678 ntBASIC18.82■□□□□ 0.6
CALR3Q96L12 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.82■□□□□ 0.6
CALR3Q96L12 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.82■□□□□ 0.6
CALR3Q96L12 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CALR3Q96L12 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.82■□□□□ 0.6
CALR3Q96L12 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.82■□□□□ 0.6
CALR3Q96L12 BX276092.7-203ENST00000637198 1536 ntBASIC18.82■□□□□ 0.6
CALR3Q96L12 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.82■□□□□ 0.6
CALR3Q96L12 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CALR3Q96L12 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CALR3Q96L12 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CALR3Q96L12 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CALR3Q96L12 MST1L-201ENST00000442552 2185 ntBASIC18.82■□□□□ 0.6
CALR3Q96L12 REXO1L11P-201ENST00000620964 1927 ntBASIC18.82■□□□□ 0.6
CALR3Q96L12 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CALR3Q96L12 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CALR3Q96L12 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.82■□□□□ 0.6
CALR3Q96L12 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
CALR3Q96L12 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CALR3Q96L12 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALR3Q96L12 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CALR3Q96L12 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALR3Q96L12 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CALR3Q96L12 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.81■□□□□ 0.6
CALR3Q96L12 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CALR3Q96L12 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CALR3Q96L12 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CALR3Q96L12 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALR3Q96L12 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.81■□□□□ 0.6
CALR3Q96L12 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALR3Q96L12 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.81■□□□□ 0.6
CALR3Q96L12 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.81■□□□□ 0.6
CALR3Q96L12 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.81■□□□□ 0.6
CALR3Q96L12 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.81■□□□□ 0.6
CALR3Q96L12 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.81■□□□□ 0.6
CALR3Q96L12 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALR3Q96L12 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.81■□□□□ 0.6
CALR3Q96L12 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms