Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SNX21Q969T3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX21Q969T3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX21Q969T3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.06■□□□□ 0.96
SNX21Q969T3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.06■□□□□ 0.96
SNX21Q969T3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.06■□□□□ 0.96
SNX21Q969T3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
SNX21Q969T3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX21Q969T3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SNX21Q969T3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SNX21Q969T3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SNX21Q969T3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNX21Q969T3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SNX21Q969T3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX21Q969T3 PRORSD1P-201ENST00000295112 541 ntBASIC21.06■□□□□ 0.96
SNX21Q969T3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX21Q969T3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNX21Q969T3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.06■□□□□ 0.96
SNX21Q969T3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SNX21Q969T3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SNX21Q969T3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.06■□□□□ 0.96
SNX21Q969T3 SLC25A1P3-201ENST00000395415 828 ntBASIC21.06■□□□□ 0.96
SNX21Q969T3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.06■□□□□ 0.96
SNX21Q969T3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.06■□□□□ 0.96
SNX21Q969T3 AC142381.4-202ENST00000563973 229 ntBASIC21.06■□□□□ 0.96
SNX21Q969T3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.06■□□□□ 0.96
SNX21Q969T3 AP000525.1-201ENST00000608286 694 ntBASIC21.06■□□□□ 0.96
SNX21Q969T3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNX21Q969T3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SNX21Q969T3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.06■□□□□ 0.96
SNX21Q969T3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX21Q969T3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SNX21Q969T3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNX21Q969T3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.06■□□□□ 0.96
SNX21Q969T3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNX21Q969T3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX21Q969T3 KRT89P-201ENST00000620027 1478 ntBASIC21.06■□□□□ 0.96
SNX21Q969T3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
SNX21Q969T3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX21Q969T3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX21Q969T3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.06■□□□□ 0.96
SNX21Q969T3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX21Q969T3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX21Q969T3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SNX21Q969T3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX21Q969T3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNX21Q969T3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SNX21Q969T3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SNX21Q969T3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNX21Q969T3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SNX21Q969T3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNX21Q969T3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNX21Q969T3 INGX-201ENST00000359239 846 ntBASIC21.05■□□□□ 0.96
SNX21Q969T3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.05■□□□□ 0.96
SNX21Q969T3 AL390955.1-201ENST00000428694 934 ntBASIC21.05■□□□□ 0.96
SNX21Q969T3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SNX21Q969T3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.05■□□□□ 0.96
SNX21Q969T3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.05■□□□□ 0.96
SNX21Q969T3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SNX21Q969T3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SNX21Q969T3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.05■□□□□ 0.96
SNX21Q969T3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
SNX21Q969T3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNX21Q969T3 AC005915.1-201ENST00000624912 2018 ntBASIC21.05■□□□□ 0.96
SNX21Q969T3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC21.05■□□□□ 0.96
SNX21Q969T3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SNX21Q969T3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNX21Q969T3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNX21Q969T3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC21.05■□□□□ 0.96
SNX21Q969T3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX21Q969T3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SNX21Q969T3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX21Q969T3 LINC02012-201ENST00000608206 1725 ntBASIC21.04■□□□□ 0.96
SNX21Q969T3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNX21Q969T3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX21Q969T3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX21Q969T3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNX21Q969T3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX21Q969T3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
SNX21Q969T3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC21.04■□□□□ 0.96
SNX21Q969T3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX21Q969T3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
SNX21Q969T3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SNX21Q969T3 AC098590.1-201ENST00000468126 897 ntBASIC21.04■□□□□ 0.96
SNX21Q969T3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.04■□□□□ 0.96
SNX21Q969T3 NEK4P2-201ENST00000580004 1012 ntBASIC21.04■□□□□ 0.96
SNX21Q969T3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.04■□□□□ 0.96
SNX21Q969T3 AL157888.1-201ENST00000631930 593 ntBASIC21.04■□□□□ 0.96
SNX21Q969T3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SNX21Q969T3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNX21Q969T3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX21Q969T3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX21Q969T3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNX21Q969T3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX21Q969T3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.04■□□□□ 0.96
SNX21Q969T3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX21Q969T3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX21Q969T3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNX21Q969T3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC21.04■□□□□ 0.96
SNX21Q969T3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms