Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATL1Q8WXF7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 AC100803.2-201ENST00000562459 1963 ntBASIC17.4■□□□□ 0.38
ATL1Q8WXF7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 DDX43P3-201ENST00000441064 443 ntBASIC17.4■□□□□ 0.38
ATL1Q8WXF7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 GUSBP12-201ENST00000513727 720 ntBASIC17.4■□□□□ 0.38
ATL1Q8WXF7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 RNF126P1-202ENST00000569893 925 ntBASIC17.4■□□□□ 0.38
ATL1Q8WXF7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ATL1Q8WXF7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.39■□□□□ 0.38
ATL1Q8WXF7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ATL1Q8WXF7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 AL031133.1-201ENST00000406807 723 ntBASIC17.38■□□□□ 0.37
ATL1Q8WXF7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 TSPY22P-201ENST00000427496 604 ntBASIC17.38■□□□□ 0.37
ATL1Q8WXF7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 MTCL1P1-201ENST00000446207 792 ntBASIC17.38■□□□□ 0.37
ATL1Q8WXF7 AC068472.1-201ENST00000474589 881 ntBASIC17.38■□□□□ 0.37
ATL1Q8WXF7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 NTF6B-201ENST00000591913 560 ntBASIC17.38■□□□□ 0.37
ATL1Q8WXF7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 AC012317.2-201ENST00000623305 2251 ntBASIC17.38■□□□□ 0.37
ATL1Q8WXF7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.38■□□□□ 0.37
ATL1Q8WXF7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms