Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF139Q8WU17 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF139Q8WU17 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF139Q8WU17 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF139Q8WU17 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RNF139Q8WU17 AL133373.2-201ENST00000623187 2828 ntBASIC18.69■□□□□ 0.58
RNF139Q8WU17 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF139Q8WU17 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF139Q8WU17 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF139Q8WU17 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF139Q8WU17 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF139Q8WU17 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF139Q8WU17 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF139Q8WU17 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RNF139Q8WU17 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF139Q8WU17 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF139Q8WU17 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF139Q8WU17 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
RNF139Q8WU17 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF139Q8WU17 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF139Q8WU17 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF139Q8WU17 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.69■□□□□ 0.58
RNF139Q8WU17 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.69■□□□□ 0.58
RNF139Q8WU17 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.69■□□□□ 0.58
RNF139Q8WU17 AC005336.2-201ENST00000593183 939 ntBASIC18.69■□□□□ 0.58
RNF139Q8WU17 AL121772.3-201ENST00000610840 674 ntBASIC18.69■□□□□ 0.58
RNF139Q8WU17 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
RNF139Q8WU17 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF139Q8WU17 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF139Q8WU17 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF139Q8WU17 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF139Q8WU17 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF139Q8WU17 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF139Q8WU17 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RNF139Q8WU17 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF139Q8WU17 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF139Q8WU17 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF139Q8WU17 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
RNF139Q8WU17 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF139Q8WU17 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF139Q8WU17 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RNF139Q8WU17 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
RNF139Q8WU17 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
RNF139Q8WU17 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
RNF139Q8WU17 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF139Q8WU17 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF139Q8WU17 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF139Q8WU17 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF139Q8WU17 DUSP5P1-201ENST00000441325 1139 ntBASIC18.68■□□□□ 0.58
RNF139Q8WU17 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF139Q8WU17 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF139Q8WU17 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF139Q8WU17 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RNF139Q8WU17 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF139Q8WU17 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF139Q8WU17 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF139Q8WU17 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF139Q8WU17 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF139Q8WU17 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RNF139Q8WU17 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF139Q8WU17 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF139Q8WU17 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RNF139Q8WU17 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RNF139Q8WU17 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF139Q8WU17 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF139Q8WU17 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF139Q8WU17 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RNF139Q8WU17 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF139Q8WU17 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RNF139Q8WU17 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF139Q8WU17 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF139Q8WU17 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF139Q8WU17 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF139Q8WU17 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RNF139Q8WU17 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF139Q8WU17 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF139Q8WU17 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF139Q8WU17 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF139Q8WU17 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF139Q8WU17 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF139Q8WU17 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF139Q8WU17 NUS1P2-201ENST00000417358 873 ntBASIC18.67■□□□□ 0.58
RNF139Q8WU17 POM121L3P-201ENST00000419331 1163 ntBASIC18.67■□□□□ 0.58
RNF139Q8WU17 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF139Q8WU17 AC096582.2-201ENST00000510860 516 ntBASIC18.67■□□□□ 0.58
RNF139Q8WU17 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF139Q8WU17 KRT126P-201ENST00000549467 1181 ntBASIC18.67■□□□□ 0.58
RNF139Q8WU17 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.67■□□□□ 0.58
RNF139Q8WU17 LINC01711-201ENST00000598340 967 ntBASIC18.67■□□□□ 0.58
RNF139Q8WU17 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF139Q8WU17 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF139Q8WU17 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF139Q8WU17 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF139Q8WU17 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF139Q8WU17 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.67■□□□□ 0.58
RNF139Q8WU17 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF139Q8WU17 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF139Q8WU17 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF139Q8WU17 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF139Q8WU17 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms