Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 AC023141.13-201ENST00000604991 943 ntBASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 AL513210.1-201ENST00000629608 234 ntBASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 AC007064.4-201ENST00000637740 555 ntBASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 AL096828.2-201ENST00000567259 1965 ntBASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 BX276092.7-203ENST00000637198 1536 ntBASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KLHDC9Q8NEP7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 SPCS2P1-201ENST00000561636 679 ntBASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 AC091812.2-201ENST00000619081 385 ntBASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 AC092902.6-201ENST00000641783 218 ntBASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
KLHDC9Q8NEP7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 DDX43P3-201ENST00000441064 443 ntBASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 IGHV3-52-201ENST00000519770 353 ntBASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 AC116407.2-201ENST00000613639 860 ntBASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KLHDC9Q8NEP7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 AC011467.4-201ENST00000594891 528 ntBASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 AC105339.1-204ENST00000636249 355 ntBASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KLHDC9Q8NEP7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.45■□□□□ 0.7
KLHDC9Q8NEP7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.45■□□□□ 0.7
KLHDC9Q8NEP7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHDC9Q8NEP7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.45■□□□□ 0.7
KLHDC9Q8NEP7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHDC9Q8NEP7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms