Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC197Q8NCU1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 AC132872.4-202ENST00000622924 2756 ntBASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CCDC197Q8NCU1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 CYP2T1P-202ENST00000641596 2535 ntBASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 AC034268.1-201ENST00000441047 882 ntBASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC197Q8NCU1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 AC006015.1-201ENST00000429970 570 ntBASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC197Q8NCU1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms