Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 AC132008.2-207ENST00000454517 770 ntBASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
LINC01555Q8NAE3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC01555Q8NAE3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC01555Q8NAE3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC01555Q8NAE3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.08■□□□□ 0.33
LINC01555Q8NAE3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC01555Q8NAE3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC01555Q8NAE3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
LINC01555Q8NAE3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.08■□□□□ 0.33
LINC01555Q8NAE3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.08■□□□□ 0.33
LINC01555Q8NAE3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.08■□□□□ 0.33
LINC01555Q8NAE3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.08■□□□□ 0.33
LINC01555Q8NAE3 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 AC111152.3-201ENST00000569699 673 ntBASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 AC019129.2-201ENST00000609837 1235 ntBASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LINC01555Q8NAE3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 AL049757.1-201ENST00000616842 1596 ntBASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms