Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST3H2BBQ8N257 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST3H2BBQ8N257 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.26□□□□□ -0.29
HIST3H2BBQ8N257 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST3H2BBQ8N257 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST3H2BBQ8N257 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 AL138724.1-201ENST00000606771 1088 ntBASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
HIST3H2BBQ8N257 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 AC023632.3-201ENST00000521633 145 ntBASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HIST3H2BBQ8N257 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST3H2BBQ8N257 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST3H2BBQ8N257 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST3H2BBQ8N257 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST3H2BBQ8N257 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST3H2BBQ8N257 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms