Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 AP000523.1-201ENST00000398242 1049 ntBASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC01561Q8N1V8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01561Q8N1V8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01561Q8N1V8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC11.96□□□□□ -0.5
LINC01561Q8N1V8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01561Q8N1V8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01561Q8N1V8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC11.96□□□□□ -0.5
LINC01561Q8N1V8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01561Q8N1V8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01561Q8N1V8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01561Q8N1V8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01561Q8N1V8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC11.96□□□□□ -0.5
LINC01561Q8N1V8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC11.96□□□□□ -0.5
LINC01561Q8N1V8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01561Q8N1V8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC11.96□□□□□ -0.5
LINC01561Q8N1V8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01561Q8N1V8 BX276092.7-203ENST00000637198 1536 ntBASIC11.96□□□□□ -0.5
LINC01561Q8N1V8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 TSPY14P-201ENST00000303979 915 ntBASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 AC005104.2-201ENST00000427818 678 ntBASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 AC128688.1-201ENST00000487626 519 ntBASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LINC01561Q8N1V8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01561Q8N1V8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms