Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RP1L1Q8IWN7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.17
RP1L1Q8IWN7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RP1L1Q8IWN7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RP1L1Q8IWN7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RP1L1Q8IWN7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RP1L1Q8IWN7 HCG11-201ENST00000411553 5696 ntBASIC16.08■□□□□ 0.17
RP1L1Q8IWN7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.08■□□□□ 0.17
RP1L1Q8IWN7 HCG4B-203ENST00000450128 991 ntBASIC16.08■□□□□ 0.17
RP1L1Q8IWN7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.08■□□□□ 0.17
RP1L1Q8IWN7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.08■□□□□ 0.17
RP1L1Q8IWN7 AC106028.4-201ENST00000614509 607 ntBASIC16.08■□□□□ 0.17
RP1L1Q8IWN7 AC092865.6-201ENST00000642101 219 ntBASIC16.08■□□□□ 0.17
RP1L1Q8IWN7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RP1L1Q8IWN7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.17
RP1L1Q8IWN7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 AC239800.4-201ENST00000603712 296 ntBASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RP1L1Q8IWN7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 AC092910.1-201ENST00000482027 1129 ntBASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 MIR770-201ENST00000390219 98 ntBASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 VN2R19P-201ENST00000442399 1052 ntBASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 AC008687.5-201ENST00000593746 558 ntBASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RP1L1Q8IWN7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.06■□□□□ 0.16
RP1L1Q8IWN7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms