Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 SLC25A1P4-201ENST00000567977 778 ntBASIC17.19■□□□□ 0.34
RNF220Q5VTB9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNF220Q5VTB9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 AC005052.1-201ENST00000625181 2492 ntBASIC17.18■□□□□ 0.34
RNF220Q5VTB9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 KRT18P41-201ENST00000518924 1277 ntBASIC17.18■□□□□ 0.34
RNF220Q5VTB9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 REXO1L10P-201ENST00000615707 1290 ntBASIC17.18■□□□□ 0.34
RNF220Q5VTB9 REXO1L12P-201ENST00000622156 912 ntBASIC17.18■□□□□ 0.34
RNF220Q5VTB9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF220Q5VTB9 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.18■□□□□ 0.34
RNF220Q5VTB9 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.17■□□□□ 0.34
RNF220Q5VTB9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 AC097488.1-201ENST00000507834 756 ntBASIC17.17■□□□□ 0.34
RNF220Q5VTB9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 AC008622.2-201ENST00000617006 1229 ntBASIC17.17■□□□□ 0.34
RNF220Q5VTB9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF220Q5VTB9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF220Q5VTB9 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms