Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 AC009102.3-201ENST00000623118 1491 ntBASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 MCCD1P2-201ENST00000423228 335 ntBASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 METTL21AP1-201ENST00000438852 635 ntBASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 YBX1P5-201ENST00000509441 847 ntBASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 AP000867.4-201ENST00000641616 219 ntBASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTC1Q2NKJ3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 AL596442.2-201ENST00000610240 980 ntBASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.97■□□□□ 0.63
CTC1Q2NKJ3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms