Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.9□□□□□ -0.18
CFHR3Q02985 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.9□□□□□ -0.18
CFHR3Q02985 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.9□□□□□ -0.18
CFHR3Q02985 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.9□□□□□ -0.18
CFHR3Q02985 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.9□□□□□ -0.18
CFHR3Q02985 DDX43P3-201ENST00000441064 443 ntBASIC13.9□□□□□ -0.18
CFHR3Q02985 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.9□□□□□ -0.18
CFHR3Q02985 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CFHR3Q02985 AL591684.3-201ENST00000605187 298 ntBASIC13.9□□□□□ -0.18
CFHR3Q02985 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.9□□□□□ -0.18
CFHR3Q02985 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.9□□□□□ -0.18
CFHR3Q02985 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CFHR3Q02985 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
CFHR3Q02985 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CFHR3Q02985 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.9□□□□□ -0.18
CFHR3Q02985 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CFHR3Q02985 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CFHR3Q02985 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CFHR3Q02985 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CFHR3Q02985 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.9□□□□□ -0.19
CFHR3Q02985 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CFHR3Q02985 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.89□□□□□ -0.19
CFHR3Q02985 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CFHR3Q02985 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CFHR3Q02985 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CFHR3Q02985 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.89□□□□□ -0.19
CFHR3Q02985 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CFHR3Q02985 AKR1C7P-201ENST00000305623 895 ntBASIC13.89□□□□□ -0.19
CFHR3Q02985 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CFHR3Q02985 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.89□□□□□ -0.19
CFHR3Q02985 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 COX5BP2-201ENST00000392354 334 ntBASIC13.89□□□□□ -0.19
CFHR3Q02985 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.89□□□□□ -0.19
CFHR3Q02985 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.89□□□□□ -0.19
CFHR3Q02985 AC122714.2-201ENST00000502787 707 ntBASIC13.89□□□□□ -0.19
CFHR3Q02985 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.89□□□□□ -0.19
CFHR3Q02985 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 RN7SL510P-201ENST00000581311 263 ntBASIC13.89□□□□□ -0.19
CFHR3Q02985 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.89□□□□□ -0.19
CFHR3Q02985 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.89□□□□□ -0.19
CFHR3Q02985 REXO1L6P-202ENST00000619970 1078 ntBASIC13.89□□□□□ -0.19
CFHR3Q02985 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.89□□□□□ -0.19
CFHR3Q02985 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CFHR3Q02985 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.89□□□□□ -0.19
CFHR3Q02985 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CFHR3Q02985 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CFHR3Q02985 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CFHR3Q02985 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.88□□□□□ -0.19
CFHR3Q02985 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CFHR3Q02985 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CFHR3Q02985 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.88□□□□□ -0.19
CFHR3Q02985 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CFHR3Q02985 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.88□□□□□ -0.19
CFHR3Q02985 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CFHR3Q02985 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CFHR3Q02985 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
CFHR3Q02985 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CFHR3Q02985 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CFHR3Q02985 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.88□□□□□ -0.19
CFHR3Q02985 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.88□□□□□ -0.19
CFHR3Q02985 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
CFHR3Q02985 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CFHR3Q02985 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CFHR3Q02985 AC009949.1-201ENST00000623048 1830 ntBASIC13.88□□□□□ -0.19
CFHR3Q02985 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CFHR3Q02985 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.88□□□□□ -0.19
CFHR3Q02985 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CFHR3Q02985 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms