Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.02□□□□□ -0.17
CCL20P78556 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.02□□□□□ -0.17
CCL20P78556 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CCL20P78556 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.02□□□□□ -0.17
CCL20P78556 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL20P78556 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL20P78556 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.02□□□□□ -0.17
CCL20P78556 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.02□□□□□ -0.17
CCL20P78556 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL20P78556 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL20P78556 FER1L4-210ENST00000615531 5998 ntBASIC14.02□□□□□ -0.17
CCL20P78556 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.02□□□□□ -0.17
CCL20P78556 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL20P78556 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.02□□□□□ -0.17
CCL20P78556 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CCL20P78556 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CCL20P78556 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.02□□□□□ -0.17
CCL20P78556 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL20P78556 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL20P78556 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL20P78556 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL20P78556 AL513523.2-202ENST00000427283 2040 ntBASIC14.02□□□□□ -0.17
CCL20P78556 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL20P78556 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL20P78556 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
CCL20P78556 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL20P78556 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL20P78556 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL20P78556 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
CCL20P78556 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 AC024909.3-201ENST00000611513 2257 ntBASIC14.01□□□□□ -0.17
CCL20P78556 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CCL20P78556 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL20P78556 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CCL20P78556 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CCL20P78556 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CCL20P78556 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.01□□□□□ -0.17
CCL20P78556 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL20P78556 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.01□□□□□ -0.17
CCL20P78556 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL20P78556 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL20P78556 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.01□□□□□ -0.17
CCL20P78556 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CCL20P78556 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CCL20P78556 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL20P78556 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CCL20P78556 REXO1L11P-201ENST00000620964 1927 ntBASIC14.01□□□□□ -0.17
CCL20P78556 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CCL20P78556 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL20P78556 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL20P78556 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL20P78556 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CCL20P78556 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
CCL20P78556 AC092368.3-202ENST00000574180 1591 ntBASIC14□□□□□ -0.17
CCL20P78556 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14□□□□□ -0.17
CCL20P78556 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CCL20P78556 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14□□□□□ -0.17
CCL20P78556 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 MIR149-201ENST00000384879 89 ntBASIC14□□□□□ -0.17
CCL20P78556 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CCL20P78556 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14□□□□□ -0.17
CCL20P78556 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms