Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AL024508.2-201ENST00000607749 1894 ntBASIC18.79■□□□□ 0.6
CHKAP35790 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.79■□□□□ 0.6
CHKAP35790 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHKAP35790 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.79■□□□□ 0.6
CHKAP35790 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.78■□□□□ 0.6
CHKAP35790 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.78■□□□□ 0.6
CHKAP35790 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CHKAP35790 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHKAP35790 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHKAP35790 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHKAP35790 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.78■□□□□ 0.6
CHKAP35790 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHKAP35790 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHKAP35790 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CHKAP35790 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHKAP35790 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CHKAP35790 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHKAP35790 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHKAP35790 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHKAP35790 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.78■□□□□ 0.6
CHKAP35790 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.78■□□□□ 0.6
CHKAP35790 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHKAP35790 AC104819.1-201ENST00000504587 486 ntBASIC18.78■□□□□ 0.6
CHKAP35790 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.78■□□□□ 0.6
CHKAP35790 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHKAP35790 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHKAP35790 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.78■□□□□ 0.6
CHKAP35790 AL691432.3-201ENST00000621860 400 ntBASIC18.78■□□□□ 0.6
CHKAP35790 AC012313.10-201ENST00000623509 926 ntBASIC18.78■□□□□ 0.6
CHKAP35790 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.78■□□□□ 0.6
CHKAP35790 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.78■□□□□ 0.6
CHKAP35790 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHKAP35790 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.78■□□□□ 0.6
CHKAP35790 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.78■□□□□ 0.6
CHKAP35790 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CHKAP35790 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHKAP35790 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CHKAP35790 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHKAP35790 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHKAP35790 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.77■□□□□ 0.6
CHKAP35790 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHKAP35790 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.77■□□□□ 0.6
CHKAP35790 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHKAP35790 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHKAP35790 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.77■□□□□ 0.6
CHKAP35790 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHKAP35790 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHKAP35790 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHKAP35790 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHKAP35790 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.77■□□□□ 0.6
CHKAP35790 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.77■□□□□ 0.6
CHKAP35790 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHKAP35790 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CHKAP35790 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CHKAP35790 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.77■□□□□ 0.6
CHKAP35790 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.77■□□□□ 0.6
CHKAP35790 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.77■□□□□ 0.6
CHKAP35790 AC099398.1-201ENST00000567919 2776 ntBASIC18.77■□□□□ 0.6
CHKAP35790 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHKAP35790 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
CHKAP35790 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHKAP35790 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHKAP35790 AC233702.3-201ENST00000578656 1387 ntBASIC18.77■□□□□ 0.6
CHKAP35790 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHKAP35790 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHKAP35790 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHKAP35790 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.77■□□□□ 0.59
CHKAP35790 PCDHA12-202ENST00000613593 2588 ntBASIC18.77■□□□□ 0.59
CHKAP35790 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHKAP35790 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHKAP35790 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHKAP35790 AC009053.2-201ENST00000563701 2365 ntBASIC18.76■□□□□ 0.59
CHKAP35790 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHKAP35790 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.76■□□□□ 0.59
CHKAP35790 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHKAP35790 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHKAP35790 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHKAP35790 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.76■□□□□ 0.59
CHKAP35790 AC246785.2-201ENST00000432512 513 ntBASIC18.76■□□□□ 0.59
CHKAP35790 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHKAP35790 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.76■□□□□ 0.59
CHKAP35790 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHKAP35790 AC011840.4-201ENST00000578471 627 ntBASIC18.76■□□□□ 0.59
CHKAP35790 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHKAP35790 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHKAP35790 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CHKAP35790 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHKAP35790 AC108860.2-201ENST00000562760 2183 ntBASIC18.76■□□□□ 0.59
CHKAP35790 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CHKAP35790 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHKAP35790 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
CHKAP35790 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CHKAP35790 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.75■□□□□ 0.59
CHKAP35790 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHKAP35790 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHKAP35790 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.75■□□□□ 0.59
CHKAP35790 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHKAP35790 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.75■□□□□ 0.59
CHKAP35790 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHKAP35790 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms