Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM17P0DL12 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM17P0DL12 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM17P0DL12 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM17P0DL12 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM17P0DL12 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM17P0DL12 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM17P0DL12 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM17P0DL12 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM17P0DL12 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM17P0DL12 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM17P0DL12 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM17P0DL12 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM17P0DL12 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM17P0DL12 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM17P0DL12 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SMIM17P0DL12 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 AL096828.2-201ENST00000567259 1965 ntBASIC13.29□□□□□ -0.28
SMIM17P0DL12 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 AL353807.1-201ENST00000427475 662 ntBASIC13.29□□□□□ -0.28
SMIM17P0DL12 AC004980.1-204ENST00000429707 299 ntBASIC13.29□□□□□ -0.28
SMIM17P0DL12 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 KSR1P1-201ENST00000446298 240 ntBASIC13.29□□□□□ -0.28
SMIM17P0DL12 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 AC011298.2-201ENST00000617989 482 ntBASIC13.29□□□□□ -0.28
SMIM17P0DL12 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM17P0DL12 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.29□□□□□ -0.28
SMIM17P0DL12 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM17P0DL12 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
SMIM17P0DL12 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms