Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.26■□□□□ 0.35
LINGO3P0C6S8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 MFAP1P1-201ENST00000442257 1255 ntBASIC17.26■□□□□ 0.35
LINGO3P0C6S8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINGO3P0C6S8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 FITM1-202ENST00000559294 800 ntBASIC17.25■□□□□ 0.35
LINGO3P0C6S8 REXO1L9P-201ENST00000604264 2108 ntBASIC17.25■□□□□ 0.35
LINGO3P0C6S8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINGO3P0C6S8 AL662844.4-201ENST00000606367 2838 ntBASIC17.25■□□□□ 0.35
LINGO3P0C6S8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 KRT8P3-201ENST00000519669 1449 ntBASIC17.24■□□□□ 0.35
LINGO3P0C6S8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 CRYGFP-201ENST00000418459 633 ntBASIC17.24■□□□□ 0.35
LINGO3P0C6S8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 AC026691.1-201ENST00000602502 2017 ntBASIC17.24■□□□□ 0.35
LINGO3P0C6S8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINGO3P0C6S8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINGO3P0C6S8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINGO3P0C6S8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINGO3P0C6S8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINGO3P0C6S8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINGO3P0C6S8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINGO3P0C6S8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINGO3P0C6S8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms