Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD48P09326 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD48P09326 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD48P09326 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.43■□□□□ 0.54
CD48P09326 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD48P09326 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.43■□□□□ 0.54
CD48P09326 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.43■□□□□ 0.54
CD48P09326 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.43■□□□□ 0.54
CD48P09326 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.43■□□□□ 0.54
CD48P09326 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.43■□□□□ 0.54
CD48P09326 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
CD48P09326 AC011498.5-201ENST00000592027 486 ntBASIC18.43■□□□□ 0.54
CD48P09326 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.43■□□□□ 0.54
CD48P09326 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CD48P09326 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CD48P09326 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CD48P09326 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD48P09326 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.43■□□□□ 0.54
CD48P09326 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CD48P09326 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CD48P09326 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.43■□□□□ 0.54
CD48P09326 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CD48P09326 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD48P09326 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD48P09326 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD48P09326 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.42■□□□□ 0.54
CD48P09326 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CD48P09326 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CD48P09326 SIRPAP1-201ENST00000448467 1770 ntBASIC18.42■□□□□ 0.54
CD48P09326 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.42■□□□□ 0.54
CD48P09326 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CD48P09326 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
CD48P09326 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.42■□□□□ 0.54
CD48P09326 HLA-J-201ENST00000462773 1622 ntBASIC18.42■□□□□ 0.54
CD48P09326 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CD48P09326 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.42■□□□□ 0.54
CD48P09326 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CD48P09326 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CD48P09326 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD48P09326 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD48P09326 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.42■□□□□ 0.54
CD48P09326 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CD48P09326 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CD48P09326 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD48P09326 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.42■□□□□ 0.54
CD48P09326 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.42■□□□□ 0.54
CD48P09326 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.42■□□□□ 0.54
CD48P09326 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.42■□□□□ 0.54
CD48P09326 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.42■□□□□ 0.54
CD48P09326 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CD48P09326 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CD48P09326 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CD48P09326 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.42■□□□□ 0.54
CD48P09326 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CD48P09326 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD48P09326 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
CD48P09326 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CD48P09326 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD48P09326 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD48P09326 AC080080.1-201ENST00000625121 2420 ntBASIC18.41■□□□□ 0.54
CD48P09326 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD48P09326 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD48P09326 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD48P09326 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.41■□□□□ 0.54
CD48P09326 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.41■□□□□ 0.54
CD48P09326 CROCCP2-202ENST00000412962 2773 ntBASIC18.41■□□□□ 0.54
CD48P09326 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD48P09326 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD48P09326 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.41■□□□□ 0.54
CD48P09326 AL845331.1-201ENST00000424978 1190 ntBASIC18.41■□□□□ 0.54
CD48P09326 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.41■□□□□ 0.54
CD48P09326 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.41■□□□□ 0.54
CD48P09326 RN7SL606P-201ENST00000472779 293 ntBASIC18.41■□□□□ 0.54
CD48P09326 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD48P09326 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.41■□□□□ 0.54
CD48P09326 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
CD48P09326 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD48P09326 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD48P09326 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.41■□□□□ 0.54
CD48P09326 AC005332.1-201ENST00000577698 1310 ntBASIC18.41■□□□□ 0.54
CD48P09326 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CD48P09326 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD48P09326 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD48P09326 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD48P09326 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD48P09326 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CD48P09326 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CD48P09326 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.4■□□□□ 0.54
CD48P09326 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD48P09326 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.4■□□□□ 0.54
CD48P09326 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD48P09326 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CD48P09326 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CD48P09326 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD48P09326 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CD48P09326 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.4■□□□□ 0.54
CD48P09326 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.4■□□□□ 0.54
CD48P09326 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.4■□□□□ 0.54
CD48P09326 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CD48P09326 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms