Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RETP07949 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RETP07949 AC005332.8-201ENST00000622750 2735 ntBASIC17.92■□□□□ 0.46
RETP07949 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.92■□□□□ 0.46
RETP07949 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RETP07949 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RETP07949 ANO7L1-203ENST00000602586 1720 ntBASIC17.92■□□□□ 0.46
RETP07949 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RETP07949 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.92■□□□□ 0.46
RETP07949 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.92■□□□□ 0.46
RETP07949 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RETP07949 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RETP07949 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RETP07949 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RETP07949 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RETP07949 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RETP07949 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RETP07949 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
RETP07949 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RETP07949 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RETP07949 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.92■□□□□ 0.46
RETP07949 AC009947.1-201ENST00000444350 727 ntBASIC17.92■□□□□ 0.46
RETP07949 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.92■□□□□ 0.46
RETP07949 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.92■□□□□ 0.46
RETP07949 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.92■□□□□ 0.46
RETP07949 MTDHP4-201ENST00000600287 670 ntBASIC17.92■□□□□ 0.46
RETP07949 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RETP07949 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RETP07949 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.92■□□□□ 0.46
RETP07949 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RETP07949 AP002414.3-201ENST00000589352 1468 ntBASIC17.92■□□□□ 0.46
RETP07949 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RETP07949 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RETP07949 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RETP07949 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RETP07949 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RETP07949 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.91■□□□□ 0.46
RETP07949 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RETP07949 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RETP07949 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RETP07949 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.91■□□□□ 0.46
RETP07949 AL357033.4-201ENST00000617703 1807 ntBASIC17.91■□□□□ 0.46
RETP07949 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RETP07949 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RETP07949 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RETP07949 MCCD1P2-201ENST00000423228 335 ntBASIC17.91■□□□□ 0.46
RETP07949 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.91■□□□□ 0.46
RETP07949 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.91■□□□□ 0.46
RETP07949 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.91■□□□□ 0.46
RETP07949 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.91■□□□□ 0.46
RETP07949 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.91■□□□□ 0.46
RETP07949 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RETP07949 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
RETP07949 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.91■□□□□ 0.46
RETP07949 AL163051.1-201ENST00000569214 1512 ntBASIC17.91■□□□□ 0.46
RETP07949 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.91■□□□□ 0.46
RETP07949 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RETP07949 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RETP07949 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RETP07949 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RETP07949 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RETP07949 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.91■□□□□ 0.46
RETP07949 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.9■□□□□ 0.46
RETP07949 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RETP07949 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.9■□□□□ 0.46
RETP07949 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.9■□□□□ 0.46
RETP07949 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
RETP07949 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.9■□□□□ 0.46
RETP07949 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.9■□□□□ 0.46
RETP07949 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.9■□□□□ 0.46
RETP07949 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.9■□□□□ 0.46
RETP07949 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 AC254562.1-201ENST00000417586 456 ntBASIC17.9■□□□□ 0.46
RETP07949 LAGE3P1-201ENST00000425356 484 ntBASIC17.9■□□□□ 0.46
RETP07949 AL645939.2-201ENST00000427340 991 ntBASIC17.9■□□□□ 0.46
RETP07949 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.9■□□□□ 0.46
RETP07949 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.9■□□□□ 0.46
RETP07949 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.9■□□□□ 0.46
RETP07949 NKAPP1-205ENST00000585790 367 ntBASIC17.9■□□□□ 0.46
RETP07949 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.9■□□□□ 0.46
RETP07949 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.9■□□□□ 0.46
RETP07949 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.9■□□□□ 0.46
RETP07949 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.9■□□□□ 0.46
RETP07949 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.9■□□□□ 0.46
RETP07949 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.9■□□□□ 0.46
RETP07949 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RETP07949 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
RETP07949 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms