Protein–RNA interactions for Protein: P04553

PRM1, Sperm protamine P1, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRM1P04553 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 BOD1-206ENST00000480951 814 ntTSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PRM1P04553 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PRM1P04553 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PRM1P04553 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PRM1P04553 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC4.31□□□□□ -1.72
PRM1P04553 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PRM1P04553 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 AC005840.4-201ENST00000541242 2494 ntBASIC4.31□□□□□ -1.72
PRM1P04553 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC4.31□□□□□ -1.72
PRM1P04553 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
PRM1P04553 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
PRM1P04553 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
PRM1P04553 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PRM1P04553 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC4.31□□□□□ -1.72
PRM1P04553 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PRM1P04553 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
PRM1P04553 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRM1P04553 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRM1P04553 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRM1P04553 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRM1P04553 VILL-207ENST00000465644 1857 ntTSL 5 BASIC4.3□□□□□ -1.72
PRM1P04553 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PRM1P04553 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRM1P04553 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRM1P04553 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRM1P04553 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRM1P04553 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRM1P04553 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
PRM1P04553 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRM1P04553 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
PRM1P04553 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC4.3□□□□□ -1.72
PRM1P04553 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC4.3□□□□□ -1.72
PRM1P04553 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
PRM1P04553 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRM1P04553 PGR-210ENST00000619228 3038 ntTSL 5 BASIC4.3□□□□□ -1.72
PRM1P04553 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRM1P04553 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRM1P04553 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms