Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 KRT18P28-201ENST00000453838 1332 ntBASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 DUTP2-201ENST00000519164 463 ntBASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 SNHG9-202ENST00000564014 471 ntBASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 VN2R19P-201ENST00000442399 1052 ntBASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 AC108073.2-201ENST00000464002 357 ntBASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 YBX1P5-201ENST00000509441 847 ntBASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 AC006504.4-201ENST00000592118 1568 ntBASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 AC098818.2-201ENST00000564925 2320 ntBASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC187A0A096LP49 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 KLF4P1-201ENST00000412782 1185 ntBASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 METTL21AP1-201ENST00000438852 635 ntBASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 SIGLEC30P-201ENST00000455569 941 ntBASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 MIR4469-201ENST00000583919 79 ntBASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 SIRPAP1-201ENST00000448467 1770 ntBASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC187A0A096LP49 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms