Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
KDM3AQ9Y4C1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.75■■■□□ 2.03
KDM3AQ9Y4C1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
KDM3AQ9Y4C1 AL359258.2-201ENST00000564063 1566 ntBASIC27.75■■■□□ 2.03
KDM3AQ9Y4C1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.74■■■□□ 2.03
KDM3AQ9Y4C1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.74■■■□□ 2.03
KDM3AQ9Y4C1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.74■■■□□ 2.03
KDM3AQ9Y4C1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
KDM3AQ9Y4C1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
KDM3AQ9Y4C1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
KDM3AQ9Y4C1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.72■■■□□ 2.03
KDM3AQ9Y4C1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.72■■■□□ 2.03
KDM3AQ9Y4C1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC27.72■■■□□ 2.03
KDM3AQ9Y4C1 AC012354.3-201ENST00000623734 483 ntBASIC27.72■■■□□ 2.03
KDM3AQ9Y4C1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
KDM3AQ9Y4C1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
KDM3AQ9Y4C1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
KDM3AQ9Y4C1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.71■■■□□ 2.03
KDM3AQ9Y4C1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
KDM3AQ9Y4C1 AL157400.5-201ENST00000507624 621 ntBASIC27.7■■■□□ 2.03
KDM3AQ9Y4C1 U85056.1-201ENST00000616429 682 ntBASIC27.7■■■□□ 2.03
KDM3AQ9Y4C1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
KDM3AQ9Y4C1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
KDM3AQ9Y4C1 AC142472.1-201ENST00000612013 1741 ntBASIC27.7■■■□□ 2.02
KDM3AQ9Y4C1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
KDM3AQ9Y4C1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.69■■■□□ 2.02
KDM3AQ9Y4C1 AP004609.3-201ENST00000610705 1884 ntBASIC27.69■■■□□ 2.02
KDM3AQ9Y4C1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.68■■■□□ 2.02
KDM3AQ9Y4C1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.68■■■□□ 2.02
KDM3AQ9Y4C1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
KDM3AQ9Y4C1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
KDM3AQ9Y4C1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
KDM3AQ9Y4C1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
KDM3AQ9Y4C1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
KDM3AQ9Y4C1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.67■■■□□ 2.02
KDM3AQ9Y4C1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
KDM3AQ9Y4C1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
KDM3AQ9Y4C1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
KDM3AQ9Y4C1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.66■■■□□ 2.02
KDM3AQ9Y4C1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.65■■■□□ 2.02
KDM3AQ9Y4C1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
KDM3AQ9Y4C1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
KDM3AQ9Y4C1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.65■■■□□ 2.02
KDM3AQ9Y4C1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
KDM3AQ9Y4C1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.02
KDM3AQ9Y4C1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.64■■■□□ 2.01
KDM3AQ9Y4C1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
KDM3AQ9Y4C1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
KDM3AQ9Y4C1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
KDM3AQ9Y4C1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
KDM3AQ9Y4C1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
KDM3AQ9Y4C1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
KDM3AQ9Y4C1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
KDM3AQ9Y4C1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
KDM3AQ9Y4C1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
KDM3AQ9Y4C1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.62■■■□□ 2.01
KDM3AQ9Y4C1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
KDM3AQ9Y4C1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.62■■■□□ 2.01
KDM3AQ9Y4C1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
KDM3AQ9Y4C1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
KDM3AQ9Y4C1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
KDM3AQ9Y4C1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.61■■■□□ 2.01
KDM3AQ9Y4C1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
KDM3AQ9Y4C1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
KDM3AQ9Y4C1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
KDM3AQ9Y4C1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
KDM3AQ9Y4C1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.6■■■□□ 2.01
KDM3AQ9Y4C1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.6■■■□□ 2.01
KDM3AQ9Y4C1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
KDM3AQ9Y4C1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
KDM3AQ9Y4C1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
KDM3AQ9Y4C1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
KDM3AQ9Y4C1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
KDM3AQ9Y4C1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
KDM3AQ9Y4C1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.57■■■□□ 2
KDM3AQ9Y4C1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27.57■■■□□ 2
KDM3AQ9Y4C1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC27.57■■■□□ 2
KDM3AQ9Y4C1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.57■■■□□ 2
KDM3AQ9Y4C1 KRT18P60-201ENST00000312876 1297 ntBASIC27.57■■■□□ 2
KDM3AQ9Y4C1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.57■■■□□ 2
KDM3AQ9Y4C1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.57■■■□□ 2
KDM3AQ9Y4C1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
KDM3AQ9Y4C1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.57■■■□□ 2
KDM3AQ9Y4C1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
KDM3AQ9Y4C1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
KDM3AQ9Y4C1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.56■■■□□ 2
KDM3AQ9Y4C1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.56■■■□□ 2
KDM3AQ9Y4C1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC27.56■■■□□ 2
KDM3AQ9Y4C1 AC007029.1-201ENST00000604183 313 ntBASIC27.55■■■□□ 2
KDM3AQ9Y4C1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
KDM3AQ9Y4C1 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.55■■■□□ 2
KDM3AQ9Y4C1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.54■■■□□ 2
KDM3AQ9Y4C1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC27.54■■■□□ 2
KDM3AQ9Y4C1 AL359504.2-201ENST00000605506 1601 ntBASIC27.54■■■□□ 2
KDM3AQ9Y4C1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.53■■■□□ 2
KDM3AQ9Y4C1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.53■■■□□ 2
KDM3AQ9Y4C1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.53■■■□□ 2
KDM3AQ9Y4C1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
KDM3AQ9Y4C1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
KDM3AQ9Y4C1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.52■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms