Protein–RNA interactions for Protein: Q9UNX4

WDR3, WD repeat-containing protein 3, humanhuman

Known RBP eCLIP

Length 943 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR3Q9UNX4 PNKP-223ENST00000629179 811 ntTSL 414.94□□□□□ -0.023e-6■■■■□ 21.1
WDR3Q9UNX4 TANGO2-213ENST00000444651 847 ntTSL 314.85□□□□□ -0.033e-6■■■■□ 21.1
WDR3Q9UNX4 TANGO2-224ENST00000485715 617 ntTSL 514.11□□□□□ -0.153e-6■■■■□ 21.1
WDR3Q9UNX4 TANGO2-223ENST00000484373 3109 ntTSL 413.74□□□□□ -0.213e-6■■■■□ 21.1
WDR3Q9UNX4 SH2B1-211ENST00000566209 533 ntTSL 413.51□□□□□ -0.253e-6■■■■□ 21.1
WDR3Q9UNX4 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC13.43□□□□□ -0.263e-6■■■■□ 21.1
WDR3Q9UNX4 ZNF800-202ENST00000393312 2375 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.353e-6■■■■□ 21.1
WDR3Q9UNX4 LEPR-204ENST00000371059 3079 ntTSL 1 (best) BASIC12.34□□□□□ -0.433e-6■■■■□ 21.1
WDR3Q9UNX4 ZNF800-204ENST00000434602 955 ntTSL 511.33□□□□□ -0.63e-6■■■■□ 21.1
WDR3Q9UNX4 HOXB7-203ENST00000567101 528 ntTSL 210.96□□□□□ -0.653e-6■■■■□ 21.1
WDR3Q9UNX4 CSDE1-217ENST00000534699 2667 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.673e-6■■■■□ 21.1
WDR3Q9UNX4 BAZ2B-208ENST00000467184 2369 ntTSL 29.93□□□□□ -0.823e-6■■■■□ 21.1
WDR3Q9UNX4 ZNF800-206ENST00000439506 410 ntTSL 1 (best)9.13□□□□□ -0.953e-6■■■■□ 21.1
WDR3Q9UNX4 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC9.01□□□□□ -0.973e-6■■■■□ 21.1
WDR3Q9UNX4 BAZ2B-213ENST00000483316 6838 ntTSL 1 (best)8.59□□□□□ -1.033e-6■■■■□ 21.1
WDR3Q9UNX4 PNKP-229ENST00000637897 190 ntTSL 58.21□□□□□ -1.13e-6■■■■□ 21.1
WDR3Q9UNX4 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.99□□□□□ -1.133e-6■■■■□ 21.1
WDR3Q9UNX4 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.49□□□□□ -1.213e-6■■■■□ 21.1
WDR3Q9UNX4 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.29□□□□□ -1.243e-6■■■■□ 21.1
WDR3Q9UNX4 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.273e-6■■■■□ 21.1
WDR3Q9UNX4 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.06□□□□□ -1.283e-6■■■■□ 21.1
WDR3Q9UNX4 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.74□□□□□ -1.333e-6■■■■□ 21.1
WDR3Q9UNX4 CSDE1-207ENST00000483407 741 ntTSL 26.21□□□□□ -1.423e-6■■■■□ 21.1
WDR3Q9UNX4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.19□□□□□ -1.423e-6■■■■□ 21.1
WDR3Q9UNX4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.1□□□□□ -1.433e-6■■■■□ 21.1
WDR3Q9UNX4 BAZ2B-215ENST00000541068 594 ntTSL 45.66□□□□□ -1.53e-6■■■■□ 21.1
WDR3Q9UNX4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.62□□□□□ -1.513e-6■■■■□ 21.1
WDR3Q9UNX4 BAZ2B-212ENST00000482503 1670 ntTSL 55.17□□□□□ -1.583e-6■■■■□ 21.1
WDR3Q9UNX4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.733e-6■■■■□ 21.1
WDR3Q9UNX4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.93e-6■■■■□ 21.1
WDR3Q9UNX4 ZNF800-205ENST00000436992 502 ntTSL 22.88□□□□□ -1.953e-6■■■■□ 21.1
WDR3Q9UNX4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.07■■□□□ 1.764e-7■■■■□ 20.7
WDR3Q9UNX4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.7■■□□□ 1.544e-7■■■■□ 20.7
WDR3Q9UNX4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.414e-7■■■■□ 20.7
WDR3Q9UNX4 DAZAP1-204ENST00000586579 619 ntTSL 323.87■■□□□ 1.414e-7■■■■□ 20.7
WDR3Q9UNX4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.234e-7■■■■□ 20.7
WDR3Q9UNX4 DAZAP1-210ENST00000592453 1021 ntTSL 515.91■□□□□ 0.144e-7■■■■□ 20.7
WDR3Q9UNX4 C22orf39-204ENST00000509549 2979 ntTSL 213.24□□□□□ -0.292e-6■■■■□ 20.7
WDR3Q9UNX4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.242e-7■■■■□ 19.8
WDR3Q9UNX4 YWHAZ-221ENST00000523131 567 ntTSL 521.67■■□□□ 1.062e-7■■■■□ 19.8
WDR3Q9UNX4 YWHAZ-208ENST00000418997 996 ntTSL 221.39■■□□□ 1.012e-7■■■■□ 19.8
WDR3Q9UNX4 YWHAZ-223ENST00000523938 626 ntTSL 521.09■□□□□ 0.972e-7■■■■□ 19.8
WDR3Q9UNX4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.932e-7■■■■□ 19.8
WDR3Q9UNX4 YWHAZ-210ENST00000437293 701 ntTSL 320.17■□□□□ 0.822e-7■■■■□ 19.8
WDR3Q9UNX4 YWHAZ-215ENST00000518736 883 ntTSL 318.97■□□□□ 0.632e-7■■■■□ 19.8
WDR3Q9UNX4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.462e-7■■■■□ 19.8
WDR3Q9UNX4 TET3-201ENST00000305799 5174 ntTSL 5 BASIC15.02■□□□□ -02e-7■■■■□ 19.8
WDR3Q9UNX4 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.132e-7■■■■□ 19.8
WDR3Q9UNX4 YWHAZ-207ENST00000395958 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.442e-7■■■■□ 19.8
WDR3Q9UNX4 YWHAZ-212ENST00000480304 2247 ntTSL 212.17□□□□□ -0.462e-7■■■■□ 19.8
WDR3Q9UNX4 YWHAZ-216ENST00000521309 1399 ntTSL 2 BASIC11.15□□□□□ -0.632e-7■■■■□ 19.8
WDR3Q9UNX4 YWHAZ-217ENST00000521328 511 ntTSL 510.73□□□□□ -0.692e-7■■■■□ 19.8
WDR3Q9UNX4 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.732e-7■■■■□ 19.8
WDR3Q9UNX4 YWHAZ-202ENST00000395948 812 ntTSL 3 BASIC10.01□□□□□ -0.812e-7■■■■□ 19.8
WDR3Q9UNX4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.482e-7■■■■□ 19.8
WDR3Q9UNX4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.692e-7■■■■□ 19.8
WDR3Q9UNX4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.53e-6■■■■□ 19.3
WDR3Q9UNX4 PHRF1-206ENST00000534320 5178 ntTSL 518.13■□□□□ 0.493e-6■■■■□ 19.3
WDR3Q9UNX4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.393e-6■■■■□ 19.3
WDR3Q9UNX4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.333e-6■■■■□ 19.3
WDR3Q9UNX4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.183e-6■■■■□ 19.3
WDR3Q9UNX4 BRD4-208ENST00000597315 892 ntTSL 528.31■■■□□ 2.121e-8■■■□□ 19
WDR3Q9UNX4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.08■■□□□ 1.771e-8■■■□□ 19
WDR3Q9UNX4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.26■■□□□ 1.151e-8■■■□□ 19
WDR3Q9UNX4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.011e-8■■■□□ 19
WDR3Q9UNX4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.51e-8■■■□□ 19
WDR3Q9UNX4 BRD4-205ENST00000594841 1821 ntAPPRIS ALT2 TSL 1 (best)14.98□□□□□ -0.011e-8■■■□□ 19
WDR3Q9UNX4 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.66□□□□□ -0.061e-8■■■□□ 19
WDR3Q9UNX4 BRD4-210ENST00000601941 604 ntTSL 513.08□□□□□ -0.321e-8■■■□□ 19
WDR3Q9UNX4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.372e-7■■■□□ 18.4
WDR3Q9UNX4 PDAP1-202ENST00000426447 767 ntTSL 515.45■□□□□ 0.062e-7■■■□□ 18.4
WDR3Q9UNX4 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.75□□□□□ -1.172e-7■■■□□ 18.4
WDR3Q9UNX4 PDAP1-203ENST00000488214 274 ntTSL 37.35□□□□□ -1.232e-7■■■□□ 18.4
WDR3Q9UNX4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.024e-6■■■□□ 18
WDR3Q9UNX4 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.73■□□□□ 0.112e-6■■■□□ 17.9
WDR3Q9UNX4 C22orf34-205ENST00000416411 542 ntTSL 414.69□□□□□ -0.062e-6■■■□□ 17.9
WDR3Q9UNX4 MAPK12-204ENST00000467891 2019 ntTSL 530.92■■■□□ 2.541e-6■■■□□ 17.8
WDR3Q9UNX4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.161e-6■■■□□ 17.8
WDR3Q9UNX4 MAPK12-206ENST00000488504 1785 ntTSL 524.06■■□□□ 1.441e-6■■■□□ 17.8
WDR3Q9UNX4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.19■■□□□ 1.31e-6■■■□□ 17.8
WDR3Q9UNX4 SH3D21-202ENST00000474766 2043 ntTSL 1 (best)22.29■■□□□ 1.161e-6■■■□□ 17.8
WDR3Q9UNX4 NOL9-205ENST00000464665 731 ntTSL 320.43■□□□□ 0.861e-6■■■□□ 17.8
WDR3Q9UNX4 NOC2L-205ENST00000487214 865 ntTSL 320.14■□□□□ 0.811e-6■■■□□ 17.8
WDR3Q9UNX4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.741e-6■■■□□ 17.8
WDR3Q9UNX4 MAPK12-209ENST00000497036 6248 ntTSL 219.55■□□□□ 0.721e-6■■■□□ 17.8
WDR3Q9UNX4 MAPK12-205ENST00000482969 2101 ntTSL 219.36■□□□□ 0.691e-6■■■□□ 17.8
WDR3Q9UNX4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.51e-6■■■□□ 17.8
WDR3Q9UNX4 SH3D21-203ENST00000480549 3182 ntTSL 218.07■□□□□ 0.481e-6■■■□□ 17.8
WDR3Q9UNX4 WDR1-206ENST00000502962 1411 ntTSL 517.37■□□□□ 0.371e-6■■■□□ 17.8
WDR3Q9UNX4 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.051e-6■■■□□ 17.8
WDR3Q9UNX4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.17■□□□□ 0.021e-6■■■□□ 17.8
WDR3Q9UNX4 HSPA9-212ENST00000523929 780 ntTSL 414.94□□□□□ -0.021e-6■■■□□ 17.8
WDR3Q9UNX4 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.081e-6■■■□□ 17.8
WDR3Q9UNX4 HSPA9-207ENST00000507097 1796 ntTSL 214.52□□□□□ -0.081e-6■■■□□ 17.8
WDR3Q9UNX4 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.21□□□□□ -0.131e-6■■■□□ 17.8
WDR3Q9UNX4 NOC2L-203ENST00000477976 4201 ntTSL 511.83□□□□□ -0.521e-6■■■□□ 17.8
WDR3Q9UNX4 HSPA9-201ENST00000297185 3321 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.661e-6■■■□□ 17.8
WDR3Q9UNX4 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC8.85□□□□□ -0.991e-6■■■□□ 17.8
WDR3Q9UNX4 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.391e-6■■■□□ 17.8
WDR3Q9UNX4 VDAC3-212ENST00000524291 533 ntTSL 25.29□□□□□ -1.561e-6■■■□□ 17.8
Retrieved 100 of 1,750 protein–RNA pairs in 21.5 ms