Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
VRTNQ9H8Y1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.36■■□□□ 1.81
VRTNQ9H8Y1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.36■■□□□ 1.81
VRTNQ9H8Y1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
VRTNQ9H8Y1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.35■■□□□ 1.81
VRTNQ9H8Y1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
VRTNQ9H8Y1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.35■■□□□ 1.81
VRTNQ9H8Y1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.34■■□□□ 1.81
VRTNQ9H8Y1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
VRTNQ9H8Y1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
VRTNQ9H8Y1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
VRTNQ9H8Y1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.81
VRTNQ9H8Y1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
VRTNQ9H8Y1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
VRTNQ9H8Y1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
VRTNQ9H8Y1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.32■■□□□ 1.8
VRTNQ9H8Y1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
VRTNQ9H8Y1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
VRTNQ9H8Y1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
VRTNQ9H8Y1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
VRTNQ9H8Y1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.31■■□□□ 1.8
VRTNQ9H8Y1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.31■■□□□ 1.8
VRTNQ9H8Y1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.31■■□□□ 1.8
VRTNQ9H8Y1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
VRTNQ9H8Y1 AC007029.1-201ENST00000604183 313 ntBASIC26.31■■□□□ 1.8
VRTNQ9H8Y1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
VRTNQ9H8Y1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
VRTNQ9H8Y1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
VRTNQ9H8Y1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
VRTNQ9H8Y1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
VRTNQ9H8Y1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VRTNQ9H8Y1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
VRTNQ9H8Y1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VRTNQ9H8Y1 MIR3960-201ENST00000583311 91 ntBASIC26.29■■□□□ 1.8
VRTNQ9H8Y1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VRTNQ9H8Y1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
VRTNQ9H8Y1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.28■■□□□ 1.8
VRTNQ9H8Y1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
VRTNQ9H8Y1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
VRTNQ9H8Y1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
VRTNQ9H8Y1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
VRTNQ9H8Y1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
VRTNQ9H8Y1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
VRTNQ9H8Y1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.27■■□□□ 1.8
VRTNQ9H8Y1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
VRTNQ9H8Y1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
VRTNQ9H8Y1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
VRTNQ9H8Y1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.26■■□□□ 1.79
VRTNQ9H8Y1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.26■■□□□ 1.79
VRTNQ9H8Y1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
VRTNQ9H8Y1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
VRTNQ9H8Y1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.25■■□□□ 1.79
VRTNQ9H8Y1 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.25■■□□□ 1.79
VRTNQ9H8Y1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.25■■□□□ 1.79
VRTNQ9H8Y1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
VRTNQ9H8Y1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
VRTNQ9H8Y1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
VRTNQ9H8Y1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
VRTNQ9H8Y1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
VRTNQ9H8Y1 RP9P-202ENST00000450133 1212 ntBASIC26.24■■□□□ 1.79
VRTNQ9H8Y1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
VRTNQ9H8Y1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
VRTNQ9H8Y1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
VRTNQ9H8Y1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
VRTNQ9H8Y1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
VRTNQ9H8Y1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.23■■□□□ 1.79
VRTNQ9H8Y1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
VRTNQ9H8Y1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
VRTNQ9H8Y1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
VRTNQ9H8Y1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.22■■□□□ 1.79
VRTNQ9H8Y1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.22■■□□□ 1.79
VRTNQ9H8Y1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.21■■□□□ 1.79
VRTNQ9H8Y1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
VRTNQ9H8Y1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
VRTNQ9H8Y1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
VRTNQ9H8Y1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
VRTNQ9H8Y1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
VRTNQ9H8Y1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
VRTNQ9H8Y1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
VRTNQ9H8Y1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.2■■□□□ 1.78
VRTNQ9H8Y1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
VRTNQ9H8Y1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
VRTNQ9H8Y1 ABHD17AP5-201ENST00000580133 923 ntBASIC26.2■■□□□ 1.78
VRTNQ9H8Y1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
VRTNQ9H8Y1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.19■■□□□ 1.78
VRTNQ9H8Y1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.19■■□□□ 1.78
VRTNQ9H8Y1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VRTNQ9H8Y1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.19■■□□□ 1.78
VRTNQ9H8Y1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.19■■□□□ 1.78
VRTNQ9H8Y1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
VRTNQ9H8Y1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
VRTNQ9H8Y1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
VRTNQ9H8Y1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.17■■□□□ 1.78
VRTNQ9H8Y1 AC093536.1-201ENST00000569153 554 ntBASIC26.17■■□□□ 1.78
VRTNQ9H8Y1 AC026202.3-201ENST00000600805 1127 ntBASIC26.17■■□□□ 1.78
VRTNQ9H8Y1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
VRTNQ9H8Y1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
VRTNQ9H8Y1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
VRTNQ9H8Y1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
VRTNQ9H8Y1 RAP2CP1-202ENST00000605179 643 ntBASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms