Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRDL1Q9BU40 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.28■□□□□ 0.68
CHRDL1Q9BU40 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.28■□□□□ 0.68
CHRDL1Q9BU40 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CHRDL1Q9BU40 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRDL1Q9BU40 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRDL1Q9BU40 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.27■□□□□ 0.68
CHRDL1Q9BU40 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHRDL1Q9BU40 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRDL1Q9BU40 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHRDL1Q9BU40 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRDL1Q9BU40 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRDL1Q9BU40 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.26■□□□□ 0.67
CHRDL1Q9BU40 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHRDL1Q9BU40 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRDL1Q9BU40 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRDL1Q9BU40 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.25■□□□□ 0.67
CHRDL1Q9BU40 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHRDL1Q9BU40 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.25■□□□□ 0.67
CHRDL1Q9BU40 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.25■□□□□ 0.67
CHRDL1Q9BU40 CR559946.2-201ENST00000623684 991 ntBASIC19.25■□□□□ 0.67
CHRDL1Q9BU40 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CHRDL1Q9BU40 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHRDL1Q9BU40 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.25■□□□□ 0.67
CHRDL1Q9BU40 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRDL1Q9BU40 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRDL1Q9BU40 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHRDL1Q9BU40 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRDL1Q9BU40 AC008813.1-201ENST00000536597 885 ntBASIC19.24■□□□□ 0.67
CHRDL1Q9BU40 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRDL1Q9BU40 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CHRDL1Q9BU40 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRDL1Q9BU40 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRDL1Q9BU40 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRDL1Q9BU40 WHAMMP3-201ENST00000611636 1609 ntBASIC19.23■□□□□ 0.67
CHRDL1Q9BU40 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRDL1Q9BU40 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRDL1Q9BU40 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.23■□□□□ 0.67
CHRDL1Q9BU40 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRDL1Q9BU40 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHRDL1Q9BU40 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRDL1Q9BU40 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.23■□□□□ 0.67
CHRDL1Q9BU40 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CHRDL1Q9BU40 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CHRDL1Q9BU40 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRDL1Q9BU40 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRDL1Q9BU40 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRDL1Q9BU40 AC091060.1-201ENST00000623524 1766 ntBASIC19.21■□□□□ 0.67
CHRDL1Q9BU40 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.21■□□□□ 0.67
CHRDL1Q9BU40 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRDL1Q9BU40 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRDL1Q9BU40 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CHRDL1Q9BU40 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CHRDL1Q9BU40 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.21■□□□□ 0.67
CHRDL1Q9BU40 HLA-V-202ENST00000446817 847 ntBASIC19.21■□□□□ 0.67
CHRDL1Q9BU40 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRDL1Q9BU40 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRDL1Q9BU40 MIR3648-2-201ENST00000581792 180 ntBASIC19.2■□□□□ 0.66
CHRDL1Q9BU40 MIR3648-1-201ENST00000615959 180 ntBASIC19.2■□□□□ 0.66
CHRDL1Q9BU40 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.2■□□□□ 0.66
CHRDL1Q9BU40 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.2■□□□□ 0.66
CHRDL1Q9BU40 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRDL1Q9BU40 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CHRDL1Q9BU40 AP004609.3-201ENST00000610705 1884 ntBASIC19.2■□□□□ 0.66
CHRDL1Q9BU40 MIR219A2-201ENST00000608502 1504 ntBASIC19.2■□□□□ 0.66
CHRDL1Q9BU40 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRDL1Q9BU40 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CHRDL1Q9BU40 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHRDL1Q9BU40 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRDL1Q9BU40 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRDL1Q9BU40 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRDL1Q9BU40 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRDL1Q9BU40 AC148477.6-201ENST00000623746 465 ntBASIC19.18■□□□□ 0.66
CHRDL1Q9BU40 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRDL1Q9BU40 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDL1Q9BU40 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHRDL1Q9BU40 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.17■□□□□ 0.66
CHRDL1Q9BU40 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRDL1Q9BU40 MIR7108-201ENST00000614319 87 ntBASIC19.17■□□□□ 0.66
CHRDL1Q9BU40 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CHRDL1Q9BU40 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDL1Q9BU40 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRDL1Q9BU40 AC145676.1-201ENST00000514988 2004 ntBASIC19.17■□□□□ 0.66
CHRDL1Q9BU40 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDL1Q9BU40 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDL1Q9BU40 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDL1Q9BU40 AC016575.1-201ENST00000607026 382 ntBASIC19.16■□□□□ 0.66
CHRDL1Q9BU40 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDL1Q9BU40 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDL1Q9BU40 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDL1Q9BU40 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRDL1Q9BU40 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.15■□□□□ 0.66
CHRDL1Q9BU40 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRDL1Q9BU40 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.15■□□□□ 0.66
CHRDL1Q9BU40 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.15■□□□□ 0.66
CHRDL1Q9BU40 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.15■□□□□ 0.66
CHRDL1Q9BU40 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CHRDL1Q9BU40 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDL1Q9BU40 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.14■□□□□ 0.65
CHRDL1Q9BU40 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms