Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
HIST1H2AJQ99878 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
HIST1H2AJQ99878 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
HIST1H2AJQ99878 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
HIST1H2AJQ99878 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
HIST1H2AJQ99878 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
HIST1H2AJQ99878 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
HIST1H2AJQ99878 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
HIST1H2AJQ99878 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
HIST1H2AJQ99878 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24■■□□□ 1.43
HIST1H2AJQ99878 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
HIST1H2AJQ99878 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
HIST1H2AJQ99878 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
HIST1H2AJQ99878 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
HIST1H2AJQ99878 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.99■■□□□ 1.43
HIST1H2AJQ99878 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.99■■□□□ 1.43
HIST1H2AJQ99878 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.99■■□□□ 1.43
HIST1H2AJQ99878 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
HIST1H2AJQ99878 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
HIST1H2AJQ99878 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.98■■□□□ 1.43
HIST1H2AJQ99878 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.98■■□□□ 1.43
HIST1H2AJQ99878 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
HIST1H2AJQ99878 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.98■■□□□ 1.43
HIST1H2AJQ99878 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
HIST1H2AJQ99878 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.98■■□□□ 1.43
HIST1H2AJQ99878 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
HIST1H2AJQ99878 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.98■■□□□ 1.43
HIST1H2AJQ99878 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.98■■□□□ 1.43
HIST1H2AJQ99878 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
HIST1H2AJQ99878 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.97■■□□□ 1.43
HIST1H2AJQ99878 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.97■■□□□ 1.43
HIST1H2AJQ99878 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
HIST1H2AJQ99878 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.96■■□□□ 1.43
HIST1H2AJQ99878 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
HIST1H2AJQ99878 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
HIST1H2AJQ99878 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
HIST1H2AJQ99878 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.96■■□□□ 1.43
HIST1H2AJQ99878 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
HIST1H2AJQ99878 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.95■■□□□ 1.42
HIST1H2AJQ99878 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
HIST1H2AJQ99878 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
HIST1H2AJQ99878 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
HIST1H2AJQ99878 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.94■■□□□ 1.42
HIST1H2AJQ99878 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.94■■□□□ 1.42
HIST1H2AJQ99878 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
HIST1H2AJQ99878 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
HIST1H2AJQ99878 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.93■■□□□ 1.42
HIST1H2AJQ99878 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
HIST1H2AJQ99878 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.92■■□□□ 1.42
HIST1H2AJQ99878 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
HIST1H2AJQ99878 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.92■■□□□ 1.42
HIST1H2AJQ99878 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
HIST1H2AJQ99878 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HIST1H2AJQ99878 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
HIST1H2AJQ99878 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
HIST1H2AJQ99878 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
HIST1H2AJQ99878 AL359504.2-201ENST00000605506 1601 ntBASIC23.91■■□□□ 1.42
HIST1H2AJQ99878 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
HIST1H2AJQ99878 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
HIST1H2AJQ99878 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
HIST1H2AJQ99878 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.9■■□□□ 1.42
HIST1H2AJQ99878 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HIST1H2AJQ99878 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HIST1H2AJQ99878 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
HIST1H2AJQ99878 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
HIST1H2AJQ99878 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.89■■□□□ 1.41
HIST1H2AJQ99878 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.88■■□□□ 1.41
HIST1H2AJQ99878 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
HIST1H2AJQ99878 MIR4449-201ENST00000578365 66 ntBASIC23.88■■□□□ 1.41
HIST1H2AJQ99878 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
HIST1H2AJQ99878 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HIST1H2AJQ99878 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.87■■□□□ 1.41
HIST1H2AJQ99878 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
HIST1H2AJQ99878 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
HIST1H2AJQ99878 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
HIST1H2AJQ99878 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HIST1H2AJQ99878 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
HIST1H2AJQ99878 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HIST1H2AJQ99878 AC091060.1-201ENST00000623524 1766 ntBASIC23.86■■□□□ 1.41
HIST1H2AJQ99878 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HIST1H2AJQ99878 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
HIST1H2AJQ99878 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HIST1H2AJQ99878 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HIST1H2AJQ99878 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HIST1H2AJQ99878 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.85■■□□□ 1.41
HIST1H2AJQ99878 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HIST1H2AJQ99878 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HIST1H2AJQ99878 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
HIST1H2AJQ99878 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HIST1H2AJQ99878 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.84■■□□□ 1.41
HIST1H2AJQ99878 AC060814.1-201ENST00000554326 538 ntBASIC23.84■■□□□ 1.41
HIST1H2AJQ99878 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.84■■□□□ 1.41
HIST1H2AJQ99878 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.83■■□□□ 1.41
HIST1H2AJQ99878 AC092803.2-201ENST00000564287 1899 ntBASIC23.83■■□□□ 1.41
HIST1H2AJQ99878 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HIST1H2AJQ99878 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.83■■□□□ 1.41
HIST1H2AJQ99878 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HIST1H2AJQ99878 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HIST1H2AJQ99878 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HIST1H2AJQ99878 AC022413.1-201ENST00000624602 984 ntBASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 322.6 ms