Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
RAPGEF4Q8WZA2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC32.66■■■□□ 2.82
RAPGEF4Q8WZA2 WHAMMP3-201ENST00000611636 1609 ntBASIC32.66■■■□□ 2.82
RAPGEF4Q8WZA2 ABCB10P1-201ENST00000614297 2181 ntBASIC32.65■■■□□ 2.82
RAPGEF4Q8WZA2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
RAPGEF4Q8WZA2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC32.65■■■□□ 2.82
RAPGEF4Q8WZA2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
RAPGEF4Q8WZA2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
RAPGEF4Q8WZA2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC32.64■■■□□ 2.82
RAPGEF4Q8WZA2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
RAPGEF4Q8WZA2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC32.64■■■□□ 2.82
RAPGEF4Q8WZA2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
RAPGEF4Q8WZA2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
RAPGEF4Q8WZA2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
RAPGEF4Q8WZA2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC32.63■■■□□ 2.81
RAPGEF4Q8WZA2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC32.63■■■□□ 2.81
RAPGEF4Q8WZA2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
RAPGEF4Q8WZA2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC32.63■■■□□ 2.81
RAPGEF4Q8WZA2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
RAPGEF4Q8WZA2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
RAPGEF4Q8WZA2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC32.62■■■□□ 2.81
RAPGEF4Q8WZA2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
RAPGEF4Q8WZA2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
RAPGEF4Q8WZA2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC32.59■■■□□ 2.81
RAPGEF4Q8WZA2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC32.59■■■□□ 2.81
RAPGEF4Q8WZA2 MIR4508-201ENST00000584178 70 ntBASIC32.59■■■□□ 2.81
RAPGEF4Q8WZA2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC32.59■■■□□ 2.81
RAPGEF4Q8WZA2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
RAPGEF4Q8WZA2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
RAPGEF4Q8WZA2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
RAPGEF4Q8WZA2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
RAPGEF4Q8WZA2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.58■■■□□ 2.81
RAPGEF4Q8WZA2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
RAPGEF4Q8WZA2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
RAPGEF4Q8WZA2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC32.58■■■□□ 2.81
RAPGEF4Q8WZA2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
RAPGEF4Q8WZA2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
RAPGEF4Q8WZA2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
RAPGEF4Q8WZA2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC32.57■■■□□ 2.8
RAPGEF4Q8WZA2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
RAPGEF4Q8WZA2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC32.57■■■□□ 2.8
RAPGEF4Q8WZA2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC32.57■■■□□ 2.8
RAPGEF4Q8WZA2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC32.57■■■□□ 2.8
RAPGEF4Q8WZA2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.8
RAPGEF4Q8WZA2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
RAPGEF4Q8WZA2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC32.56■■■□□ 2.8
RAPGEF4Q8WZA2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
RAPGEF4Q8WZA2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC32.55■■■□□ 2.8
RAPGEF4Q8WZA2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
RAPGEF4Q8WZA2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
RAPGEF4Q8WZA2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
RAPGEF4Q8WZA2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC32.53■■■□□ 2.8
RAPGEF4Q8WZA2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
RAPGEF4Q8WZA2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
RAPGEF4Q8WZA2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC32.52■■■□□ 2.8
RAPGEF4Q8WZA2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC32.52■■■□□ 2.8
RAPGEF4Q8WZA2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
RAPGEF4Q8WZA2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
RAPGEF4Q8WZA2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC32.52■■■□□ 2.8
RAPGEF4Q8WZA2 HES6-204ENST00000409182 863 ntTSL 2 BASIC32.51■■■□□ 2.79
RAPGEF4Q8WZA2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC32.51■■■□□ 2.79
RAPGEF4Q8WZA2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
RAPGEF4Q8WZA2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC32.51■■■□□ 2.79
RAPGEF4Q8WZA2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
RAPGEF4Q8WZA2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
RAPGEF4Q8WZA2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
RAPGEF4Q8WZA2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC32.5■■■□□ 2.79
RAPGEF4Q8WZA2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
RAPGEF4Q8WZA2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
RAPGEF4Q8WZA2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC32.5■■■□□ 2.79
RAPGEF4Q8WZA2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
RAPGEF4Q8WZA2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC32.49■■■□□ 2.79
RAPGEF4Q8WZA2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC32.49■■■□□ 2.79
RAPGEF4Q8WZA2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
RAPGEF4Q8WZA2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC32.49■■■□□ 2.79
RAPGEF4Q8WZA2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC32.48■■■□□ 2.79
RAPGEF4Q8WZA2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
RAPGEF4Q8WZA2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
RAPGEF4Q8WZA2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
RAPGEF4Q8WZA2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
RAPGEF4Q8WZA2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
RAPGEF4Q8WZA2 AC103724.3-201ENST00000564481 992 ntBASIC32.47■■■□□ 2.79
RAPGEF4Q8WZA2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC32.47■■■□□ 2.79
RAPGEF4Q8WZA2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC32.46■■■□□ 2.79
RAPGEF4Q8WZA2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
RAPGEF4Q8WZA2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RAPGEF4Q8WZA2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
RAPGEF4Q8WZA2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC32.46■■■□□ 2.79
RAPGEF4Q8WZA2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC32.45■■■□□ 2.79
RAPGEF4Q8WZA2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
RAPGEF4Q8WZA2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
RAPGEF4Q8WZA2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
RAPGEF4Q8WZA2 OR2A1-AS1-204ENST00000470435 602 ntBASIC32.44■■■□□ 2.78
RAPGEF4Q8WZA2 AL031848.2-201ENST00000607670 837 ntBASIC32.44■■■□□ 2.78
RAPGEF4Q8WZA2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
RAPGEF4Q8WZA2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC32.44■■■□□ 2.78
RAPGEF4Q8WZA2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC32.44■■■□□ 2.78
RAPGEF4Q8WZA2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
RAPGEF4Q8WZA2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
RAPGEF4Q8WZA2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms