Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRUB1Q8WWH5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
TRUB1Q8WWH5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.42■■□□□ 1.18
TRUB1Q8WWH5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRUB1Q8WWH5 AC108673.1-201ENST00000510422 1159 ntBASIC22.42■■□□□ 1.18
TRUB1Q8WWH5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRUB1Q8WWH5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRUB1Q8WWH5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRUB1Q8WWH5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.41■■□□□ 1.18
TRUB1Q8WWH5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.41■■□□□ 1.18
TRUB1Q8WWH5 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC22.41■■□□□ 1.18
TRUB1Q8WWH5 AC097358.2-201ENST00000607541 1159 ntBASIC22.41■■□□□ 1.18
TRUB1Q8WWH5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.41■■□□□ 1.18
TRUB1Q8WWH5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRUB1Q8WWH5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRUB1Q8WWH5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.41■■□□□ 1.18
TRUB1Q8WWH5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRUB1Q8WWH5 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRUB1Q8WWH5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRUB1Q8WWH5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRUB1Q8WWH5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRUB1Q8WWH5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
TRUB1Q8WWH5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.39■■□□□ 1.18
TRUB1Q8WWH5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
TRUB1Q8WWH5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
TRUB1Q8WWH5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.39■■□□□ 1.17
TRUB1Q8WWH5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TRUB1Q8WWH5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRUB1Q8WWH5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRUB1Q8WWH5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TRUB1Q8WWH5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TRUB1Q8WWH5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRUB1Q8WWH5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
TRUB1Q8WWH5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.37■■□□□ 1.17
TRUB1Q8WWH5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRUB1Q8WWH5 AC142472.1-201ENST00000612013 1741 ntBASIC22.37■■□□□ 1.17
TRUB1Q8WWH5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.36■■□□□ 1.17
TRUB1Q8WWH5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.36■■□□□ 1.17
TRUB1Q8WWH5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
TRUB1Q8WWH5 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
TRUB1Q8WWH5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.35■■□□□ 1.17
TRUB1Q8WWH5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRUB1Q8WWH5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.35■■□□□ 1.17
TRUB1Q8WWH5 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRUB1Q8WWH5 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
TRUB1Q8WWH5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
TRUB1Q8WWH5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.34■■□□□ 1.17
TRUB1Q8WWH5 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRUB1Q8WWH5 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
TRUB1Q8WWH5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.33■■□□□ 1.17
TRUB1Q8WWH5 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRUB1Q8WWH5 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
TRUB1Q8WWH5 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRUB1Q8WWH5 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRUB1Q8WWH5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
TRUB1Q8WWH5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRUB1Q8WWH5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.33■■□□□ 1.16
TRUB1Q8WWH5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.33■■□□□ 1.16
TRUB1Q8WWH5 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRUB1Q8WWH5 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TRUB1Q8WWH5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRUB1Q8WWH5 AC005559.1-201ENST00000589661 871 ntBASIC22.32■■□□□ 1.16
TRUB1Q8WWH5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TRUB1Q8WWH5 AC079834.2-201ENST00000609776 1949 ntBASIC22.31■■□□□ 1.16
TRUB1Q8WWH5 ERN1-208ENST00000606895 2068 ntBASIC22.31■■□□□ 1.16
TRUB1Q8WWH5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
TRUB1Q8WWH5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.31■■□□□ 1.16
TRUB1Q8WWH5 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRUB1Q8WWH5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRUB1Q8WWH5 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.3■■□□□ 1.16
TRUB1Q8WWH5 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRUB1Q8WWH5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRUB1Q8WWH5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRUB1Q8WWH5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRUB1Q8WWH5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.29■■□□□ 1.16
TRUB1Q8WWH5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRUB1Q8WWH5 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC22.29■■□□□ 1.16
TRUB1Q8WWH5 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRUB1Q8WWH5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRUB1Q8WWH5 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRUB1Q8WWH5 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRUB1Q8WWH5 MIR6090-201ENST00000622481 60 ntBASIC22.28■■□□□ 1.16
TRUB1Q8WWH5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRUB1Q8WWH5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.28■■□□□ 1.16
TRUB1Q8WWH5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.28■■□□□ 1.16
TRUB1Q8WWH5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRUB1Q8WWH5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRUB1Q8WWH5 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRUB1Q8WWH5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRUB1Q8WWH5 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRUB1Q8WWH5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRUB1Q8WWH5 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRUB1Q8WWH5 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRUB1Q8WWH5 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRUB1Q8WWH5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.26■■□□□ 1.15
TRUB1Q8WWH5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRUB1Q8WWH5 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRUB1Q8WWH5 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRUB1Q8WWH5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRUB1Q8WWH5 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms