Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.03■■□□□ 1.6
PCDH20Q8N6Y1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
PCDH20Q8N6Y1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.03■■□□□ 1.6
PCDH20Q8N6Y1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.03■■□□□ 1.6
PCDH20Q8N6Y1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.02■■□□□ 1.6
PCDH20Q8N6Y1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.02■■□□□ 1.6
PCDH20Q8N6Y1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH20Q8N6Y1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.02■■□□□ 1.6
PCDH20Q8N6Y1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.02■■□□□ 1.6
PCDH20Q8N6Y1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH20Q8N6Y1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDH20Q8N6Y1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH20Q8N6Y1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDH20Q8N6Y1 AL449106.1-201ENST00000608517 1980 ntBASIC25■■□□□ 1.59
PCDH20Q8N6Y1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25■■□□□ 1.59
PCDH20Q8N6Y1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25■■□□□ 1.59
PCDH20Q8N6Y1 NTF6A-201ENST00000591175 560 ntBASIC25■■□□□ 1.59
PCDH20Q8N6Y1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDH20Q8N6Y1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH20Q8N6Y1 AL359504.2-201ENST00000605506 1601 ntBASIC25■■□□□ 1.59
PCDH20Q8N6Y1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH20Q8N6Y1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH20Q8N6Y1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.99■■□□□ 1.59
PCDH20Q8N6Y1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
PCDH20Q8N6Y1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.98■■□□□ 1.59
PCDH20Q8N6Y1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
PCDH20Q8N6Y1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDH20Q8N6Y1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDH20Q8N6Y1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDH20Q8N6Y1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDH20Q8N6Y1 MIR3960-201ENST00000583311 91 ntBASIC24.96■■□□□ 1.59
PCDH20Q8N6Y1 U85056.1-201ENST00000616429 682 ntBASIC24.96■■□□□ 1.59
PCDH20Q8N6Y1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
PCDH20Q8N6Y1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
PCDH20Q8N6Y1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
PCDH20Q8N6Y1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDH20Q8N6Y1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PCDH20Q8N6Y1 RP9P-202ENST00000450133 1212 ntBASIC24.95■■□□□ 1.58
PCDH20Q8N6Y1 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.95■■□□□ 1.58
PCDH20Q8N6Y1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PCDH20Q8N6Y1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDH20Q8N6Y1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
PCDH20Q8N6Y1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDH20Q8N6Y1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.94■■□□□ 1.58
PCDH20Q8N6Y1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
PCDH20Q8N6Y1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
PCDH20Q8N6Y1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDH20Q8N6Y1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDH20Q8N6Y1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.93■■□□□ 1.58
PCDH20Q8N6Y1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
PCDH20Q8N6Y1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.93■■□□□ 1.58
PCDH20Q8N6Y1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
PCDH20Q8N6Y1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDH20Q8N6Y1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.93■■□□□ 1.58
PCDH20Q8N6Y1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDH20Q8N6Y1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDH20Q8N6Y1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDH20Q8N6Y1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDH20Q8N6Y1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.92■■□□□ 1.58
PCDH20Q8N6Y1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDH20Q8N6Y1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDH20Q8N6Y1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDH20Q8N6Y1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDH20Q8N6Y1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDH20Q8N6Y1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
PCDH20Q8N6Y1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDH20Q8N6Y1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.91■■□□□ 1.58
PCDH20Q8N6Y1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDH20Q8N6Y1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PCDH20Q8N6Y1 AC093536.1-201ENST00000569153 554 ntBASIC24.9■■□□□ 1.58
PCDH20Q8N6Y1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.9■■□□□ 1.58
PCDH20Q8N6Y1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDH20Q8N6Y1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
PCDH20Q8N6Y1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.89■■□□□ 1.58
PCDH20Q8N6Y1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDH20Q8N6Y1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDH20Q8N6Y1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDH20Q8N6Y1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.89■■□□□ 1.57
PCDH20Q8N6Y1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDH20Q8N6Y1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
PCDH20Q8N6Y1 AC009831.1-201ENST00000580420 1582 ntBASIC24.88■■□□□ 1.57
PCDH20Q8N6Y1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.88■■□□□ 1.57
PCDH20Q8N6Y1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDH20Q8N6Y1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDH20Q8N6Y1 AC026202.3-201ENST00000600805 1127 ntBASIC24.88■■□□□ 1.57
PCDH20Q8N6Y1 AC133552.2-201ENST00000619106 1032 ntBASIC24.88■■□□□ 1.57
PCDH20Q8N6Y1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDH20Q8N6Y1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDH20Q8N6Y1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDH20Q8N6Y1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
PCDH20Q8N6Y1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
PCDH20Q8N6Y1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDH20Q8N6Y1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDH20Q8N6Y1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDH20Q8N6Y1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDH20Q8N6Y1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
PCDH20Q8N6Y1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDH20Q8N6Y1 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.86■■□□□ 1.57
PCDH20Q8N6Y1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.85■■□□□ 1.57
PCDH20Q8N6Y1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms