Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
LINC00346Q8IVM7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.64■■□□□ 1.06
LINC00346Q8IVM7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
LINC00346Q8IVM7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.64■■□□□ 1.06
LINC00346Q8IVM7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
LINC00346Q8IVM7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.64■■□□□ 1.05
LINC00346Q8IVM7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINC00346Q8IVM7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LINC00346Q8IVM7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC00346Q8IVM7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC00346Q8IVM7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LINC00346Q8IVM7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.63■■□□□ 1.05
LINC00346Q8IVM7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
LINC00346Q8IVM7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC00346Q8IVM7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC00346Q8IVM7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINC00346Q8IVM7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINC00346Q8IVM7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINC00346Q8IVM7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINC00346Q8IVM7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LINC00346Q8IVM7 MIR3648-2-201ENST00000581792 180 ntBASIC21.62■■□□□ 1.05
LINC00346Q8IVM7 MIR3648-1-201ENST00000615959 180 ntBASIC21.62■■□□□ 1.05
LINC00346Q8IVM7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LINC00346Q8IVM7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.61■■□□□ 1.05
LINC00346Q8IVM7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LINC00346Q8IVM7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
LINC00346Q8IVM7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LINC00346Q8IVM7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LINC00346Q8IVM7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LINC00346Q8IVM7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LINC00346Q8IVM7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LINC00346Q8IVM7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LINC00346Q8IVM7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LINC00346Q8IVM7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.6■■□□□ 1.05
LINC00346Q8IVM7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
LINC00346Q8IVM7 AL359258.2-201ENST00000564063 1566 ntBASIC21.6■■□□□ 1.05
LINC00346Q8IVM7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.6■■□□□ 1.05
LINC00346Q8IVM7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LINC00346Q8IVM7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LINC00346Q8IVM7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
LINC00346Q8IVM7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
LINC00346Q8IVM7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LINC00346Q8IVM7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LINC00346Q8IVM7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LINC00346Q8IVM7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.59■■□□□ 1.05
LINC00346Q8IVM7 AC016575.1-201ENST00000607026 382 ntBASIC21.59■■□□□ 1.05
LINC00346Q8IVM7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LINC00346Q8IVM7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LINC00346Q8IVM7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LINC00346Q8IVM7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LINC00346Q8IVM7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
LINC00346Q8IVM7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.58■■□□□ 1.05
LINC00346Q8IVM7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LINC00346Q8IVM7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LINC00346Q8IVM7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LINC00346Q8IVM7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00346Q8IVM7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00346Q8IVM7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00346Q8IVM7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
LINC00346Q8IVM7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00346Q8IVM7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.57■■□□□ 1.04
LINC00346Q8IVM7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.57■■□□□ 1.04
LINC00346Q8IVM7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00346Q8IVM7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
LINC00346Q8IVM7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LINC00346Q8IVM7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.56■■□□□ 1.04
LINC00346Q8IVM7 DUSP8P4-201ENST00000399538 1761 ntBASIC21.56■■□□□ 1.04
LINC00346Q8IVM7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.56■■□□□ 1.04
LINC00346Q8IVM7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00346Q8IVM7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00346Q8IVM7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00346Q8IVM7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00346Q8IVM7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00346Q8IVM7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00346Q8IVM7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
LINC00346Q8IVM7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
LINC00346Q8IVM7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
LINC00346Q8IVM7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
LINC00346Q8IVM7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
LINC00346Q8IVM7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LINC00346Q8IVM7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LINC00346Q8IVM7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.54■■□□□ 1.04
LINC00346Q8IVM7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINC00346Q8IVM7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINC00346Q8IVM7 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.54■■□□□ 1.04
LINC00346Q8IVM7 MIR7108-201ENST00000614319 87 ntBASIC21.54■■□□□ 1.04
LINC00346Q8IVM7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LINC00346Q8IVM7 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.54■■□□□ 1.04
LINC00346Q8IVM7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.54■■□□□ 1.04
LINC00346Q8IVM7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINC00346Q8IVM7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
LINC00346Q8IVM7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINC00346Q8IVM7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LINC00346Q8IVM7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LINC00346Q8IVM7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINC00346Q8IVM7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINC00346Q8IVM7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.53■■□□□ 1.04
LINC00346Q8IVM7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LINC00346Q8IVM7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00346Q8IVM7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms