Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAI1Q7Z5J4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAI1Q7Z5J4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
RAI1Q7Z5J4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.22■□□□□ 0.99
RAI1Q7Z5J4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAI1Q7Z5J4 DUX4L18-201ENST00000553347 1267 ntBASIC21.21■□□□□ 0.99
RAI1Q7Z5J4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAI1Q7Z5J4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAI1Q7Z5J4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
RAI1Q7Z5J4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAI1Q7Z5J4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAI1Q7Z5J4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RAI1Q7Z5J4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAI1Q7Z5J4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.18■□□□□ 0.98
RAI1Q7Z5J4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.18■□□□□ 0.98
RAI1Q7Z5J4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAI1Q7Z5J4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.18■□□□□ 0.98
RAI1Q7Z5J4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
RAI1Q7Z5J4 MIR3960-201ENST00000583311 91 ntBASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 AL035685.1-201ENST00000636663 812 ntBASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.16■□□□□ 0.98
RAI1Q7Z5J4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RAI1Q7Z5J4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
RAI1Q7Z5J4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAI1Q7Z5J4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAI1Q7Z5J4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RAI1Q7Z5J4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.15■□□□□ 0.98
RAI1Q7Z5J4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAI1Q7Z5J4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.14■□□□□ 0.98
RAI1Q7Z5J4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAI1Q7Z5J4 PVT1_1.1-201ENST00000615125 194 ntBASIC21.14■□□□□ 0.98
RAI1Q7Z5J4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.14■□□□□ 0.97
RAI1Q7Z5J4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAI1Q7Z5J4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAI1Q7Z5J4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAI1Q7Z5J4 AC009299.2-201ENST00000482477 511 ntBASIC21.14■□□□□ 0.97
RAI1Q7Z5J4 MIR6765-201ENST00000614092 87 ntBASIC21.14■□□□□ 0.97
RAI1Q7Z5J4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.13■□□□□ 0.97
RAI1Q7Z5J4 MIR4508-201ENST00000584178 70 ntBASIC21.13■□□□□ 0.97
RAI1Q7Z5J4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAI1Q7Z5J4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.13■□□□□ 0.97
RAI1Q7Z5J4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAI1Q7Z5J4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.12■□□□□ 0.97
RAI1Q7Z5J4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.12■□□□□ 0.97
RAI1Q7Z5J4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
RAI1Q7Z5J4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAI1Q7Z5J4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RAI1Q7Z5J4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.11■□□□□ 0.97
RAI1Q7Z5J4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RAI1Q7Z5J4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RAI1Q7Z5J4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAI1Q7Z5J4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAI1Q7Z5J4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.1■□□□□ 0.97
RAI1Q7Z5J4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAI1Q7Z5J4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAI1Q7Z5J4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAI1Q7Z5J4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAI1Q7Z5J4 AL359504.2-201ENST00000605506 1601 ntBASIC21.09■□□□□ 0.97
RAI1Q7Z5J4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAI1Q7Z5J4 WHAMMP3-201ENST00000611636 1609 ntBASIC21.08■□□□□ 0.97
RAI1Q7Z5J4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAI1Q7Z5J4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAI1Q7Z5J4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAI1Q7Z5J4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.08■□□□□ 0.96
RAI1Q7Z5J4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.08■□□□□ 0.96
RAI1Q7Z5J4 LINC01003-201ENST00000564834 1764 ntBASIC21.07■□□□□ 0.96
RAI1Q7Z5J4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAI1Q7Z5J4 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.07■□□□□ 0.96
RAI1Q7Z5J4 AC139795.1-202ENST00000500444 432 ntBASIC21.07■□□□□ 0.96
RAI1Q7Z5J4 AC010980.1-201ENST00000587192 1142 ntBASIC21.07■□□□□ 0.96
RAI1Q7Z5J4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.07■□□□□ 0.96
RAI1Q7Z5J4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RAI1Q7Z5J4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAI1Q7Z5J4 AC142086.6-201ENST00000621154 1765 ntBASIC21.06■□□□□ 0.96
RAI1Q7Z5J4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAI1Q7Z5J4 AC103724.3-201ENST00000564481 992 ntBASIC21.06■□□□□ 0.96
RAI1Q7Z5J4 AC074183.2-201ENST00000623112 922 ntBASIC21.06■□□□□ 0.96
RAI1Q7Z5J4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAI1Q7Z5J4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAI1Q7Z5J4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
RAI1Q7Z5J4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms