Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.11
SHFQ7M4L6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHFQ7M4L6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SHFQ7M4L6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SHFQ7M4L6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SHFQ7M4L6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SHFQ7M4L6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SHFQ7M4L6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22■■□□□ 1.11
SHFQ7M4L6 AC021231.2-201ENST00000594613 730 ntBASIC22■■□□□ 1.11
SHFQ7M4L6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22■■□□□ 1.11
SHFQ7M4L6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SHFQ7M4L6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22■■□□□ 1.11
SHFQ7M4L6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.99■■□□□ 1.11
SHFQ7M4L6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHFQ7M4L6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SHFQ7M4L6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHFQ7M4L6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHFQ7M4L6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SHFQ7M4L6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.99■■□□□ 1.11
SHFQ7M4L6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SHFQ7M4L6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
SHFQ7M4L6 WHAMMP3-201ENST00000611636 1609 ntBASIC21.98■■□□□ 1.11
SHFQ7M4L6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHFQ7M4L6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.98■■□□□ 1.11
SHFQ7M4L6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHFQ7M4L6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.98■■□□□ 1.11
SHFQ7M4L6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SHFQ7M4L6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.98■■□□□ 1.11
SHFQ7M4L6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SHFQ7M4L6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.98■■□□□ 1.11
SHFQ7M4L6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SHFQ7M4L6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SHFQ7M4L6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.97■■□□□ 1.11
SHFQ7M4L6 ERN1-208ENST00000606895 2068 ntBASIC21.96■■□□□ 1.11
SHFQ7M4L6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SHFQ7M4L6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHFQ7M4L6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SHFQ7M4L6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHFQ7M4L6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHFQ7M4L6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
SHFQ7M4L6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.95■■□□□ 1.1
SHFQ7M4L6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.95■■□□□ 1.1
SHFQ7M4L6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHFQ7M4L6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHFQ7M4L6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.94■■□□□ 1.1
SHFQ7M4L6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
SHFQ7M4L6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SHFQ7M4L6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHFQ7M4L6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHFQ7M4L6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHFQ7M4L6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.93■■□□□ 1.1
SHFQ7M4L6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.93■■□□□ 1.1
SHFQ7M4L6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHFQ7M4L6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SHFQ7M4L6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHFQ7M4L6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SHFQ7M4L6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHFQ7M4L6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHFQ7M4L6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.92■■□□□ 1.1
SHFQ7M4L6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHFQ7M4L6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHFQ7M4L6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHFQ7M4L6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
SHFQ7M4L6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHFQ7M4L6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHFQ7M4L6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHFQ7M4L6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHFQ7M4L6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SHFQ7M4L6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SHFQ7M4L6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
SHFQ7M4L6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SHFQ7M4L6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHFQ7M4L6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.88■■□□□ 1.09
SHFQ7M4L6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHFQ7M4L6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.88■■□□□ 1.09
SHFQ7M4L6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.88■■□□□ 1.09
SHFQ7M4L6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHFQ7M4L6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SHFQ7M4L6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHFQ7M4L6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.87■■□□□ 1.09
SHFQ7M4L6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHFQ7M4L6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHFQ7M4L6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SHFQ7M4L6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHFQ7M4L6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHFQ7M4L6 AC010501.1-201ENST00000606270 1962 ntBASIC21.87■■□□□ 1.09
SHFQ7M4L6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.86■■□□□ 1.09
SHFQ7M4L6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHFQ7M4L6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.86■■□□□ 1.09
SHFQ7M4L6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.86■■□□□ 1.09
SHFQ7M4L6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHFQ7M4L6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHFQ7M4L6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHFQ7M4L6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.85■■□□□ 1.09
SHFQ7M4L6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHFQ7M4L6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHFQ7M4L6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
SHFQ7M4L6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHFQ7M4L6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHFQ7M4L6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms